RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.9■□□□□ 0.14
HMGCS1-203ENST00000507004 MUC6Q6W4X9 2439 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 A0A087WWV3 80 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 H3BQV1 296 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 K7ERI5 159 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 TEX28O15482 410 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 HSP90AA2PQ14568 343 aaPredicted RBP15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 ARL6IP4Q66PJ3 421 aaKnown RBP15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 TMC5Q6UXY8 1006 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 TMEM134Q9H6X4 195 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 KCND2Q9NZV8 630 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 PCDHB6Q9Y5E3 794 aa15.89■□□□□ 0.13
HMGCS1-203ENST00000507004 C2CD4DB7Z1M9 353 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 C2CD2LO14523 706 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 PAPLNO95428 1278 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 BMP15O95972 392 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 TOB1P50616 345 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 ATF7IP2Q5U623 682 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 MCTP1Q6DN14 999 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 KREMEN2Q8NCW0 462 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 BSNDQ8WZ55 320 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 TMX3Q96JJ7 454 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 UROC1Q96N76 676 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 MAN1C1Q9NR34 630 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 TOPORSQ9NS56 1045 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 ZDHHC7Q9NXF8 308 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 TNFSF13BQ9Y275 285 aa15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.88■□□□□ 0.13
HMGCS1-203ENST00000507004 ZNF318Q5VUA4 2279 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 RECQL4O94761 1208 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 SCP2P22307 547 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 ATP2C1P98194 919 aaPredicted RBP15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 CDR2LQ86X02 465 aaPredicted RBP15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 NXPE3Q969Y0 559 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 AK8Q96MA6 479 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 CCDC94Q9BW85 323 aaPredicted RBP15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 MRPL4Q9BYD3 311 aaKnown RBP15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 SNTG2Q9NY99 539 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 KLK14Q9P0G3 267 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 IGSF9Q9P2J2 1179 aa15.87■□□□□ 0.13
HMGCS1-203ENST00000507004 CCDC169A6NNP5 214 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 H0YCG3 227 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 TMEM189-UBE2V1I3L0A0 370 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 TRAPPC3O43617 180 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 LIG1P18858 919 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 GUCY2CP25092 1073 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 SMTNP53814 917 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 PTPN5P54829 565 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 NBR1Q14596 966 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 ECM1Q16610 540 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 HYIQ5T013 277 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 RTL10Q7L3V2 364 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 RIN2Q8WYP3 895 aaPredicted RBP15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 PIK3R5Q8WYR1 880 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 ASIC4Q96FT7 647 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 CDK5RAP3Q96JB5 506 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 NTPCRQ9BSD7 190 aaKnown RBP15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 TTPALQ9BTX7 342 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 GPR62Q9BZJ7 368 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 KMT5AQ9NQR1 393 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 SLC38A7Q9NVC3 462 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 SMC3Q9UQE7 1217 aa15.86■□□□□ 0.13
HMGCS1-203ENST00000507004 CCDC195A0A1B0GUA6 201 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 GJB2P29033 226 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 NPTX2P47972 431 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 PEX3P56589 373 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 RINT1Q6NUQ1 792 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 DCLRE1AQ6PJP8 1040 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 TAS1R1Q7RTX1 841 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 DDX27Q96GQ7 796 aaKnown RBP15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 WDR6Q9NNW5 1121 aaKnown RBP15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 ARHGAP28Q9P2N2 729 aa15.85■□□□□ 0.13
HMGCS1-203ENST00000507004 PIEZO1Q92508 2521 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 E9PMD0 336 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 PTGESO14684 152 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 HIP1RO75146 1068 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 WEE2P0C1S8 567 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 MCF2P10911 925 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 SP100P23497 879 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 ABCD1P33897 745 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 GRM5P41594 1212 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 STRN3Q13033 797 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 C1orf186Q6ZWK4 172 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 SMG7Q92540 1137 aaKnown RBP15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 PIDD1Q9HB75 910 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 LARSQ9P2J5 1176 aaKnown RBP15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 LIMD1Q9UGP4 676 aa15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 ZFP37Q9Y6Q3 630 aaPredicted RBP15.84■□□□□ 0.13
HMGCS1-203ENST00000507004 ZDBF2Q9HCK1 2354 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 TGM5O43548 720 aa15.83■□□□□ 0.12
HMGCS1-203ENST00000507004 BRD1O95696 1058 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms