RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 DHCR24Q15392 516 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 ZBTB41Q5SVQ8 909 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 CCDC62Q6P9F0 684 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 STRA8Q7Z7C7 330 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 GLB1L2Q8IW92 636 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 ARHGEF19Q8IW93 802 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 MSL3Q8N5Y2 521 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 LILRA3Q8N6C8 439 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 SMC1BQ8NDV3 1235 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 OR10H5Q8NGA6 315 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 PPP1R14CQ8TAE6 165 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 CHAC2Q8WUX2 184 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 CHTF18Q8WVB6 975 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 GAB3Q8WWW8 586 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 GPATCH3Q96I76 525 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 NELL2Q99435 816 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 CDC5LQ99459 802 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 SLC29A3Q9BZD2 475 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 TMX1Q9H3N1 280 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 CAAP1Q9H8G2 361 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 RSAD1Q9HA92 442 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 THG1LQ9NWX6 298 aaKnown RBP3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 COL4A3Q01955 1670 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 UNC119BA6NIH7 251 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 TMEM200CA6NKL6 621 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 DIRC3C9JPN6 131 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 LEFTY2O00292 366 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 SEC24DO94855 1032 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 HLA-DOAP06340 250 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 PFKMP08237 780 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 HKR1P10072 659 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 MGAT1P26572 445 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 SOX5P35711 763 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 KPNA1P52294 538 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 SART3Q15020 963 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 DDB1Q16531 1140 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 BEAN1Q3B7T3 259 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 CCDC178Q5BJE1 867 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 TAS1R1Q7RTX1 841 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 C1QL2Q7Z5L3 287 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 NXPE1Q8N323 547 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 CPEB3Q8NE35 698 aaKnown RBP3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 FDXACB1Q9BRP7 624 aaPredicted RBP3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 POGKQ9P215 609 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 CHST2Q9Y4C5 530 aa3.7□□□□□ -1.82
TOPBP1-205ENST00000506779 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 SHROOM4Q9ULL8 1493 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 B5MCH6 92 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 TGM5O43548 720 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 CLSTN1O94985 981 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 EYA4O95677 639 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 DDX6P26196 483 aaKnown RBP eCLIP3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 CANXP27824 592 aaKnown RBP3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 CXCR5P32302 372 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 LSSP48449 732 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 AMPD3Q01432 767 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 APBA1Q02410 837 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 EFCAB12Q6NXP0 572 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 UBR7Q8N806 425 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 RNF169Q8NCN4 708 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 OR2W6PQ8NHA6 318 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 LEO1Q8WVC0 666 aaPredicted RBP3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 NELL1Q92832 810 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 COQ10AQ96MF6 247 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 SPC25Q9HBM1 224 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 INSL6Q9Y581 213 aa3.69□□□□□ -1.82
TOPBP1-205ENST00000506779 COL11A2P13942 1736 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 A0A1W2PR48 441 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 NEMP1O14524 444 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 ZNF185O15231 689 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 RAB11FIP3O75154 756 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 LTA4HP09960 611 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 CLEC2LP0C7M8 214 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 RBP3P10745 1247 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 ZSCAN20P17040 1043 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 LSP1P33241 339 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 BMPR1AP36894 532 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 ID4P47928 161 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 BLOC1S1P78537 153 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 OCRLQ01968 901 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 TP53BP2Q13625 1128 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 UBE3CQ15386 1083 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 PDCD4Q53EL6 469 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 RNF187Q5TA31 235 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 DRICH1Q6PGQ1 229 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 LHFPL2Q6ZUX7 228 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 SRRM1Q8IYB3 904 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 AHI1Q8N157 1196 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 TFAP2CQ92754 450 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 ZNF496Q96IT1 587 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 GPR101Q96P66 508 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 EMC7Q9NPA0 242 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 SPTLC3Q9NUV7 552 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 RNF181Q9P0P0 153 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 APOBEC2Q9Y235 224 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 USP15Q9Y4E8 981 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 RB1CC1Q8TDY2 1594 aa3.68□□□□□ -1.82
TOPBP1-205ENST00000506779 PRSS38A1L453 326 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 ANKRD62A6NC57 917 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms