RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ZHX3Q9H4I2 956 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 PARVGQ9HBI0 331 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 PTPRHQ9HD43 1115 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 MARCH5Q9NX47 278 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 CLEC1BQ9P126 229 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 CD207Q9UJ71 328 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 BARX2Q9UMQ3 279 aaPredicted RBP17.06■□□□□ 0.32
MED28-204ENST00000506409 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 SRGAP2BP0DMP2 458 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 ZNF131P52739 623 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 NCKAP1LP55160 1127 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 PKP1Q13835 747 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 GIT2Q14161 759 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
MED28-204ENST00000506409 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
MED28-204ENST00000506409 CCDC73Q6ZRK6 1079 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 ZBTB33Q86T24 672 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 MYCT1Q8N699 235 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 TMEM87AQ8NBN3 555 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 AUTS2Q8WXX7 1259 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 MSLNLQ96KJ4 702 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 IRAK3Q9Y616 596 aa17.05■□□□□ 0.32
MED28-204ENST00000506409 PTGESO14684 152 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 PPP6R2O75170 966 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 YEATS4O95619 227 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 THP07101 528 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 MCF2P10911 925 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 PROZP22891 400 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 GRM5P41594 1212 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 TUSC3Q13454 348 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 SMAD4Q13485 552 aaKnown RBP17.04■□□□□ 0.32
MED28-204ENST00000506409 LLGL2Q6P1M3 1020 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 MPZL3Q6UWV2 235 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 HAUS6Q7Z4H7 955 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 CEP120Q8N960 986 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 CCDC94Q9BW85 323 aaPredicted RBP17.04■□□□□ 0.32
MED28-204ENST00000506409 COLEC11Q9BWP8 271 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 ANKFY1Q9P2R3 1169 aa17.04■□□□□ 0.32
MED28-204ENST00000506409 MUC3AQ02505 3323 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 F8W810 466 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 K7ENM7 598 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 MBTPS2O43462 519 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 TRAK2O60296 914 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 TOM1L1O75674 476 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 SOD2P04179 222 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 HARSP12081 509 aaKnown RBP17.03■□□□□ 0.32
MED28-204ENST00000506409 SCP2P22307 547 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 STAT6P42226 847 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 YARSP54577 528 aaKnown RBP17.03■□□□□ 0.32
MED28-204ENST00000506409 OSTNP61366 133 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 COASYQ13057 564 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 KCNC3Q14003 757 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 ZPBP2Q6X784 338 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 TMEM184AQ6ZMB5 413 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 SV2BQ7L1I2 683 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 FAM178BQ8IXR5 827 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 SMRP1Q8NCR6 262 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 RABGGTAQ92696 567 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 KCNN1Q92952 543 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 BICD1Q96G01 975 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 CXCL16Q9H2A7 254 aa17.03■□□□□ 0.32
MED28-204ENST00000506409 MRPL17Q9NRX2 175 aaKnown RBP17.03■□□□□ 0.32
MED28-204ENST00000506409 TOPORSQ9NS56 1045 aaPredicted RBP17.03■□□□□ 0.32
MED28-204ENST00000506409 A0A087X0B3 334 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 ABLIM1O14639 778 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 CLASP2O75122 1294 aaKnown RBP17.02■□□□□ 0.32
MED28-204ENST00000506409 BRD1O95696 1058 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 URODP06132 367 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.32
MED28-204ENST00000506409 NOLC1Q14978 699 aaKnown RBP eCLIP17.02■□□□□ 0.32
MED28-204ENST00000506409 SMAD2Q15796 467 aaKnown RBP17.02■□□□□ 0.32
MED28-204ENST00000506409 GLRA4Q5JXX5 417 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 DYMQ7RTS9 669 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 CASP10Q92851 521 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 ZBTB45Q96K62 511 aaPredicted RBP17.02■□□□□ 0.32
MED28-204ENST00000506409 HERC2P3Q9BVR0 1158 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 EMILIN2Q9BXX0 1053 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 CACNG4Q9UBN1 327 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 ADAM28Q9UKQ2 775 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 HCFC2Q9Y5Z7 792 aa17.02■□□□□ 0.32
MED28-204ENST00000506409 C2CD2LO14523 706 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 HNRNPDLO14979 420 aaKnown RBP17.01■□□□□ 0.31
MED28-204ENST00000506409 CLDN3O15551 220 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 TADA2AO75478 443 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 EFEMP2O95967 443 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
MED28-204ENST00000506409 GLUD2P49448 558 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 LIG4P49917 911 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 NAB2Q15742 525 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 ATL3Q6DD88 541 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 KIAA1841Q6NSI8 718 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 ANKRD54Q6NXT1 300 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 FUT10Q6P4F1 479 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 TAS1R1Q7RTX1 841 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 RNF168Q8IYW5 571 aaPredicted RBP17.01■□□□□ 0.31
MED28-204ENST00000506409 PDILTQ8N807 584 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms