RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 SHDQ96IW2 340 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 MBOAT7Q96N66 472 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 KXD1Q9BQD3 176 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 EIF2AK1Q9BQI3 630 aaKnown RBP9.15□□□□□ -0.94
SNF8-204ENST00000506104 RPP25Q9BUL9 199 aaKnown RBP9.15□□□□□ -0.94
SNF8-204ENST00000506104 PHF20Q9BVI0 1012 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 BRMS1Q9HCU9 246 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNF8-204ENST00000506104 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNF8-204ENST00000506104 EPS15L1Q9UBC2 864 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 GIT1Q9Y2X7 761 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 PPME1Q9Y570 386 aa9.15□□□□□ -0.94
SNF8-204ENST00000506104 COL4A3Q01955 1670 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 SF3B1O75533 1304 aaKnown RBP eCLIP9.14□□□□□ -0.95
SNF8-204ENST00000506104 MED19A0JLT2 244 aaPredicted RBP9.14□□□□□ -0.95
SNF8-204ENST00000506104 POTEMA6NI47 508 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 M0R2N6 131 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 LAMTOR5O43504 91 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 KINO60870 393 aaKnown RBP9.14□□□□□ -0.95
SNF8-204ENST00000506104 XYLBO75191 536 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 ZMYND10O75800 440 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 C8AP07357 584 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 CD72P21854 359 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 KRT2P35908 639 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 ARPP19P56211 112 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 CREMQ03060 361 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 CSTF1Q05048 431 aaKnown RBP9.14□□□□□ -0.95
SNF8-204ENST00000506104 MBTD1Q05BQ5 628 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 DSC1Q08554 894 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 GRIK3Q13003 919 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 HTR4Q13639 388 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 CALCRLQ16602 461 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 RTP2Q5QGT7 225 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 POTEGQ6S5H5 508 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 CYP26C1Q6V0L0 522 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 C1orf210Q8IVY1 113 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 SLFN12Q8IYM2 578 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 SLC7A14Q8TBB6 771 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 HAS1Q92839 578 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 NXPE3Q969Y0 559 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 CCDC51Q96ER9 411 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 ZNF274Q96GC6 653 aaPredicted RBP9.14□□□□□ -0.95
SNF8-204ENST00000506104 PAAF1Q9BRP4 392 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 TTPALQ9BTX7 342 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 AGXT2Q9BYV1 514 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 BCO2Q9BYV7 579 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 RXFP1Q9HBX9 757 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 KCNMB3Q9NPA1 279 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 GPRC5CQ9NQ84 441 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 XPNPEP1Q9NQW7 623 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 ZDHHC7Q9NXF8 308 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 SNTG2Q9NY99 539 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 ORC3Q9UBD5 711 aaPredicted RBP9.14□□□□□ -0.95
SNF8-204ENST00000506104 PCDHA12Q9UN75 941 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 USP20Q9Y2K6 914 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 GDAQ9Y2T3 454 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 FANCMQ8IYD8 2048 aa9.14□□□□□ -0.95
SNF8-204ENST00000506104 VWA8A3KMH1 1905 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 FAM170BA6NMN3 283 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 TBX3O15119 743 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 DGAT1O75907 488 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 KIF4AO95239 1232 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 GLRA2P23416 452 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 SCRN1Q12765 414 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 NR5A1Q13285 461 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 TUSC3Q13454 348 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 TRIM29Q14134 588 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 NPY5RQ15761 445 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 MLF2Q15773 248 aaPredicted RBP9.13□□□□□ -0.95
SNF8-204ENST00000506104 MTSS1LQ765P7 747 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 NOSTRINQ8IVI9 506 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 PJA1Q8NG27 643 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 HDAC7Q8WUI4 952 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 ATRIPQ8WXE1 791 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 RUBCNQ92622 972 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 FGF14Q92915 247 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 MCRS1Q96EZ8 462 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 ADPGKQ9BRR6 497 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 SEMA4AQ9H3S1 761 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 TTC12Q9H892 705 aaPredicted RBP9.13□□□□□ -0.95
SNF8-204ENST00000506104 HCFC1R1Q9NWW0 138 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 FNIP2Q9P278 1114 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 CDH7Q9ULB5 785 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 USP18Q9UMW8 372 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 RALGAPA1Q6GYQ0 2036 aa9.13□□□□□ -0.95
SNF8-204ENST00000506104 N4BP3O15049 544 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 SLITRK3O94933 977 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 THP07101 528 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 ELF1P32519 619 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 OR1D2P34982 312 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 ARL2P36404 184 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 EVCP57679 992 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 PRPF4BQ13523 1007 aaKnown RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 PUM1Q14671 1186 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNF8-204ENST00000506104 RSPO4Q2I0M5 234 aaPredicted RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 PABPC1LQ4VXU2 614 aaKnown RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 SLC44A4Q53GD3 710 aa9.12□□□□□ -0.95
SNF8-204ENST00000506104 EARS2Q5JPH6 523 aaKnown RBP9.12□□□□□ -0.95
SNF8-204ENST00000506104 GLRA4Q5JXX5 417 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms