RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 STAMQ92783 540 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 CFAP54Q96N23 3096 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 NACC1Q96RE7 527 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 RHOBTB2Q9BYZ6 727 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 CXCL16Q9H2A7 254 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.58□□□□□ -0.4
SIL1-208ENST00000505945 PRMT7Q9NVM4 692 aaPredicted RBP12.58□□□□□ -0.4
SIL1-208ENST00000505945 FNIP2Q9P278 1114 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
SIL1-208ENST00000505945 FAM186AA6NE01 2351 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 PTGESO14684 152 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 SEC24BO95487 1268 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 C1RP00736 705 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 LIG1P18858 919 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 CYP11B2P19099 503 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 AOC1P19801 751 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 TUSC3Q13454 348 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
SIL1-208ENST00000505945 HSP90AA2PQ14568 343 aaPredicted RBP12.57□□□□□ -0.4
SIL1-208ENST00000505945 SAFBQ15424 915 aaKnown RBP eCLIP12.57□□□□□ -0.4
SIL1-208ENST00000505945 MAPK6Q16659 721 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 FAM187BQ17R55 369 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 RTP2Q5QGT7 225 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 CDCA2Q69YH5 1023 aaPredicted RBP12.57□□□□□ -0.4
SIL1-208ENST00000505945 PADI6Q6TGC4 694 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 ASCL5Q7RTU5 278 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 CEP57Q86XR8 500 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 NOSTRINQ8IVI9 506 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 ZBTB8OSQ8IWT0 167 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 GPR65Q8IYL9 337 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 ST13P5Q8NFI4 369 aaPredicted RBP12.57□□□□□ -0.4
SIL1-208ENST00000505945 PRIMPOLQ96LW4 560 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 POLR3CQ9BUI4 534 aaPredicted RBP12.57□□□□□ -0.4
SIL1-208ENST00000505945 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 SNTG2Q9NY99 539 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 EPS15L1Q9UBC2 864 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 DOCK8Q8NF50 2099 aa12.57□□□□□ -0.4
SIL1-208ENST00000505945 MTCL1Q9Y4B5 1905 aaKnown RBP12.56□□□□□ -0.4
SIL1-208ENST00000505945 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 ARHGEF35A5YM69 484 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 STK25O00506 426 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 N4BP3O15049 544 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 RECQL4O94761 1208 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 KIF4AO95239 1232 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 PAPLNO95428 1278 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 EDN1P05305 212 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 THP07101 528 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 RPA1P27694 616 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 NBL1P41271 181 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 FAM171A1Q5VUB5 890 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 EEF1DP3Q658K8 133 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 ERMNQ8TAM6 284 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 C2orf40Q9H1Z8 148 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 ZDHHC7Q9NXF8 308 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 PPP4R2Q9NY27 417 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.56□□□□□ -0.4
SIL1-208ENST00000505945 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 SF3B1O75533 1304 aaKnown RBP eCLIP12.56□□□□□ -0.41e-8■■■■■ 160.4
SIL1-208ENST00000505945 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
SIL1-208ENST00000505945 DOCK6Q96HP0 2047 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 ACKR2O00590 384 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 ZMYND10O75800 440 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 PRKCBP05771 671 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 OR52Z1P0C646 297 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 LAMP2P13473 410 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 NAMPTP43490 491 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 CREMQ03060 361 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 NAB2Q15742 525 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 ECM1Q16610 540 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 GET4Q7L5D6 327 aaPredicted RBP12.55□□□□□ -0.4
SIL1-208ENST00000505945 FRMD5Q7Z6J6 570 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 CCDC83Q8IWF9 413 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 DTWD2Q8NBA8 298 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 DEPTORQ8TB45 409 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 LNX1Q8TBB1 728 aaPredicted RBP12.55□□□□□ -0.4
SIL1-208ENST00000505945 NXPE3Q969Y0 559 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 RTP3Q9BQQ7 232 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 CLSTN3Q9BQT9 956 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 ADPGKQ9BRR6 497 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 TTPALQ9BTX7 342 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 KIFC3Q9BVG8 833 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 CA14Q9ULX7 337 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 LIMCH1Q9UPQ0 1083 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 GDAQ9Y2T3 454 aa12.55□□□□□ -0.4
SIL1-208ENST00000505945 VPS13AQ96RL7 3174 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 ADAM12O43184 909 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 SRFP11831 508 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
SIL1-208ENST00000505945 NTHL1P78549 312 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 PSMD5Q16401 504 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms