RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SHISA7A6NL88 538 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 FAM170BA6NMN3 283 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 C1QTNF9BB2RNN3 333 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 TRAK2O60296 914 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 C1QTNF9P0C862 333 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 ATP4AP20648 1035 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 CD72P21854 359 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 PTGIRP43119 386 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 RPS9P46781 194 aaKnown RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 RBM25P49756 843 aaKnown RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 PRKCQQ04759 706 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 ITGB3BPQ13352 177 aaPredicted RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 CSRP2Q16527 193 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 RSPO2Q6UXX9 243 aaPredicted RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 CYB5R4Q7L1T6 521 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 GET4Q7L5D6 327 aaPredicted RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 SMG7Q92540 1137 aaKnown RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 EMILIN2Q9BXX0 1053 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 FAM126AQ9BYI3 521 aaPredicted RBP7.95□□□□□ -1.14
VCAN-206ENST00000505615 TBC1D13Q9NVG8 400 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 APC2O95996 2303 aa7.95□□□□□ -1.14
VCAN-206ENST00000505615 TICRRQ7Z2Z1 1910 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 EML5Q05BV3 1969 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 CARNS1A5YM72 827 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 MEIS3P2A8K0S8 358 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 ZNF213O14771 459 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 TEX28O15482 410 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 CCNE2O96020 404 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 SSBP05455 408 aaKnown RBP eCLIP7.94□□□□□ -1.14
VCAN-206ENST00000505615 MYBP10242 640 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 ZSCAN20P17040 1043 aaPredicted RBP7.94□□□□□ -1.14
VCAN-206ENST00000505615 FGFR4P22455 802 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 EIF4BP23588 611 aaKnown RBP7.94□□□□□ -1.14
VCAN-206ENST00000505615 SLC26A2P50443 739 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 CLCN3P51790 818 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 MTAPQ13126 283 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 SLC44A4Q53GD3 710 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 ZNF484Q5JVG2 852 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 C20orf194Q5TEA3 1177 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 PARM1Q6UWI2 310 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 UNQ6494/PRO21346Q6UXR6 183 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 LYSMD3Q7Z3D4 306 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 CCDC60Q8IWA6 550 aaPredicted RBP7.94□□□□□ -1.14
VCAN-206ENST00000505615 PIBF1Q8WXW3 757 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 DDX1Q92499 740 aaKnown RBP7.94□□□□□ -1.14
VCAN-206ENST00000505615 CUL5Q93034 780 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 LPPQ93052 612 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 UBAC1Q9BSL1 405 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 MYL10Q9BUA6 226 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 HERC2P3Q9BVR0 1158 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 CHMP4BQ9H444 224 aaKnown RBP7.94□□□□□ -1.14
VCAN-206ENST00000505615 KCNH7Q9NS40 1196 aa7.94□□□□□ -1.14
VCAN-206ENST00000505615 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.94□□□□□ -1.14
VCAN-206ENST00000505615 PDCD11Q14690 1871 aaKnown RBP7.94□□□□□ -1.14
VCAN-206ENST00000505615 ADAMTS20P59510 1910 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 MAFGO15525 162 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 EFEMP2O95967 443 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 GLUD1P00367 558 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 DARSP14868 501 aaKnown RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 LIMK1P53667 647 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 MFAP1P55081 439 aaKnown RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 NLRP11P59045 1033 aaKnown RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 TROAPQ12815 778 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 UBE2SQ16763 222 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 PLA2G4EQ3MJ16 856 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 NOMO2Q5JPE7 1267 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 ZBTB41Q5SVQ8 909 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 ABHD15Q6UXT9 468 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 ZNF280BQ86YH2 543 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 RNF168Q8IYW5 571 aaPredicted RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 CELF5Q8N6W0 485 aaKnown RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 RSPH1Q8WYR4 309 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 ZNF668Q96K58 619 aaPredicted RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 RPS6KC1Q96S38 1066 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 MXRA8Q9BRK3 442 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 NT5C3AQ9H0P0 336 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 RXFP1Q9HBX9 757 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 MRPL17Q9NRX2 175 aaKnown RBP7.93□□□□□ -1.14
VCAN-206ENST00000505615 RAB23Q9ULC3 237 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 WASF3Q9UPY6 502 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 VWA8A3KMH1 1905 aa7.93□□□□□ -1.14
VCAN-206ENST00000505615 CCER2I3L3R5 266 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 TAF4O00268 1085 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 C2CD2LO14523 706 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 OFD1O75665 1012 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 SOD2P04179 222 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 NCLP19338 710 aaKnown RBP7.92□□□□□ -1.14
VCAN-206ENST00000505615 PHKA2P46019 1235 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 RNF144AP50876 292 aaPredicted RBP7.92□□□□□ -1.14
VCAN-206ENST00000505615 GPC3P51654 580 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 LONRF3Q496Y0 759 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 LRSAM1Q6UWE0 723 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 PRR23BQ6ZRT6 265 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 TPRG1Q6ZUI0 275 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 TAS1R1Q7RTX1 841 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 TICAM2Q86XR7 235 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 SDF4Q9BRK5 362 aa7.92□□□□□ -1.14
VCAN-206ENST00000505615 SPZ1Q9BXG8 430 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms