RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 IL23AQ9NPF7 189 aa10.19□□□□□ -0.78
TPM3-218ENST00000505010 PRMT7Q9NVM4 692 aaPredicted RBP10.19□□□□□ -0.78
TPM3-218ENST00000505010 DMAC2Q9NW81 257 aa10.19□□□□□ -0.78
TPM3-218ENST00000505010 GTF2IRD1Q9UHL9 959 aa10.19□□□□□ -0.78
TPM3-218ENST00000505010 YBX2Q9Y2T7 364 aaKnown RBP10.19□□□□□ -0.78
TPM3-218ENST00000505010 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
TPM3-218ENST00000505010 MUC6Q6W4X9 2439 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 TLR3O15455 904 aaKnown RBP10.18□□□□□ -0.78
TPM3-218ENST00000505010 CABYRO75952 493 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 AFPP02771 609 aaKnown RBP10.18□□□□□ -0.78
TPM3-218ENST00000505010 ADRB2P07550 413 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 GARTP22102 1010 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 ADSSP30520 456 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 HOXC8P31273 242 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 CDK7P50613 346 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 ADAM17P78536 824 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 SNRNP35Q16560 246 aaKnown RBP10.18□□□□□ -0.78
TPM3-218ENST00000505010 KIZQ2M2Z5 673 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 SPECC1LQ69YQ0 1117 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 GDF6Q6KF10 455 aaPredicted RBP10.18□□□□□ -0.78
TPM3-218ENST00000505010 ZPBP2Q6X784 338 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 CCDC186Q7Z3E2 898 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 ZBTB33Q86T24 672 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
TPM3-218ENST00000505010 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 RDH13Q8NBN7 331 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 ZSWIM2Q8NEG5 633 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 NDST4Q9H3R1 872 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 MINDY3Q9H8M7 445 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 IFT122Q9HBG6 1241 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 IMPACTQ9P2X3 320 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 COG5Q9UP83 839 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 GINS2Q9Y248 185 aa10.18□□□□□ -0.78
TPM3-218ENST00000505010 ITIH6Q6UXX5 1313 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TTLL13PA6NNM8 815 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 ARVCFO00192 962 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 ACKR2O00590 384 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 KIAA0391O15091 583 aaKnown RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 B4GALT5O43286 388 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TLL1O43897 1013 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 EXTL3O43909 919 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 CSDE1O75534 798 aaKnown RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 ERLIN2O94905 339 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TRIM49P0CI25 452 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TRIM49CP0CI26 452 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 CYP2C18P33260 490 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 PBX1P40424 430 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 GSDMDP57764 484 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 CDC42EP1Q00587 391 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 POU5F1BQ06416 359 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 BFSP1Q12934 665 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 HSP90AA2PQ14568 343 aaPredicted RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 SYCP1Q15431 976 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 ZNF568Q3ZCX4 644 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 ATF7IP2Q5U623 682 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TAF2Q6P1X5 1199 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 INTS8Q75QN2 995 aaKnown RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 OTOP2Q7RTS6 562 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 SRGAP1Q7Z6B7 1085 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 SESTD1Q86VW0 696 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 PPFIBP1Q86W92 1011 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 CBWD2Q8IUF1 395 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TMEM174Q8WUU8 243 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 ZBTB45Q96K62 511 aaPredicted RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 OSMRQ99650 979 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 ACO2Q99798 780 aaKnown RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 FAM213AQ9BRX8 229 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 TCHPQ9BT92 498 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 GCOM2Q9BZD3 368 aaPredicted RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 ADAMTS10Q9H324 1103 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 FZD8Q9H461 694 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 MMRN2Q9H8L6 949 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 AGO2Q9UKV8 859 aaKnown RBP10.17□□□□□ -0.78
TPM3-218ENST00000505010 CITO14578 2027 aa10.17□□□□□ -0.78
TPM3-218ENST00000505010 GRIN2DO15399 1336 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 A0A0U1RQG5 324 aaPredicted RBP10.16□□□□□ -0.78
TPM3-218ENST00000505010 A0A1W2PQC6 194 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 FAM86C2PA6NEL3 165 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 M0QZ92 97 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 MAPK13O15264 365 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 CLDN3O15551 220 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 TSPAN1O60635 241 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 TOM1L1O75674 476 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 TPM1P09493 284 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 IQCF3P0C7M6 154 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 KLK7P49862 253 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 VAMP7P51809 220 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 RABGGTBP53611 331 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 MRPS6P82932 125 aaKnown RBP10.16□□□□□ -0.78
TPM3-218ENST00000505010 MYL7Q01449 175 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 KCNH2Q12809 1159 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 ITGA7Q13683 1181 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 NOLC1Q14978 699 aaKnown RBP eCLIP10.16□□□□□ -0.78
TPM3-218ENST00000505010 PTGISQ16647 500 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 EEF1DP3Q658K8 133 aa10.16□□□□□ -0.78
TPM3-218ENST00000505010 MPZL3Q6UWV2 235 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms