RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 HS2ST1Q7LGA3 356 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 DYMQ7RTS9 669 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 TMCO2Q7Z6W1 182 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 USP37Q86T82 979 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 DDX53Q86TM3 631 aaKnown RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 KLHL23Q8NBE8 558 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 SMG8Q8ND04 991 aaKnown RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 SPPL3Q8TCT6 385 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 POF1BQ8WVV4 589 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 BSNDQ8WZ55 320 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 TIGD1Q96MW7 591 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 OXCT2Q9BYC2 517 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 PANK2Q9BZ23 570 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 CWH43Q9H720 699 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 RMND1Q9NWS8 449 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 TBC1D7Q9P0N9 293 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 DERAQ9Y315 318 aa10.77□□□□□ -0.69
NR1I3-220ENST00000505005 R3HCC1Q9Y3T6 440 aaKnown RBP10.77□□□□□ -0.69
NR1I3-220ENST00000505005 MYMKA6NI61 221 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 GOLGA6L22H0YM25 854 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 OGTO15294 1046 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 ZC3H11AO75152 810 aaKnown RBP eCLIP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 SMC2O95347 1197 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 GCNT3O95395 438 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 GALTP07902 379 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 ATF7P17544 494 aaPredicted RBP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 CYP3A5P20815 502 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 PPP2R3AQ06190 1150 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 PKP1Q13835 747 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 NT5DC1Q5TFE4 455 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 USP49Q70CQ1 688 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 TMC7Q7Z402 723 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 SLC39A11Q8N1S5 342 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 CACTINQ8WUQ7 758 aaKnown RBP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 HLA-CQ95604 372 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 DNAJC19Q96DA6 116 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 IGSF21Q96ID5 467 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 GAD1Q99259 594 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 TARS2Q9BW92 718 aaKnown RBP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 EMILIN2Q9BXX0 1053 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 EIF2AQ9BY44 585 aaKnown RBP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 ASB7Q9H672 318 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 RPF1Q9H9Y2 349 aaKnown RBP10.76□□□□□ -0.69
NR1I3-220ENST00000505005 CERS4Q9HA82 394 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 PTPRHQ9HD43 1115 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 INPP5FQ9Y2H2 1132 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 ZDHHC9Q9Y397 364 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 IRAK3Q9Y616 596 aa10.76□□□□□ -0.69
NR1I3-220ENST00000505005 B4GALT5O43286 388 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 TADA2AO75478 443 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 IL18RAPO95256 599 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 ITGB1P05556 798 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 KCNE1P15382 129 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 MLH1P40692 756 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 OR1G1P47890 313 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 SKIV2LQ15477 1246 aaKnown RBP10.75□□□□□ -0.69
NR1I3-220ENST00000505005 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 DCLRE1AQ6PJP8 1040 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 NRDE2Q9H7Z3 1164 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 ENTPD7Q9NQZ7 604 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 MRPL17Q9NRX2 175 aaKnown RBP10.75□□□□□ -0.69
NR1I3-220ENST00000505005 RNF19AQ9NV58 838 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 EXOC1Q9NV70 894 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 SNTG2Q9NY99 539 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 THEGQ9P2T0 379 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 UBQLN1Q9UMX0 589 aaKnown RBP10.75□□□□□ -0.69
NR1I3-220ENST00000505005 HPSEQ9Y251 543 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 STYXL1Q9Y6J8 313 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 TCHHQ07283 1943 aa10.75□□□□□ -0.69
NR1I3-220ENST00000505005 TDRD15B5MCY1 1934 aaKnown RBP10.74□□□□□ -0.69
NR1I3-220ENST00000505005 A0A0B4J269 797 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 TMEM189-UBE2V1I3L0A0 370 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 PRPF40AO75400 957 aaKnown RBP10.74□□□□□ -0.69
NR1I3-220ENST00000505005 RECQL4O94761 1208 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 ZNF202O95125 648 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 POMCP01189 267 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 URODP06132 367 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-220ENST00000505005 PFKFB1P16118 471 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 HOXB8P17481 243 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-220ENST00000505005 MRPS5P82675 430 aaKnown RBP10.74□□□□□ -0.69
NR1I3-220ENST00000505005 DSC1Q08554 894 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 MYBPC2Q14324 1141 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 USP41Q3LFD5 358 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 XKR4Q5GH76 650 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 CYP26C1Q6V0L0 522 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 SFR1Q86XK3 245 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 COLGALT2Q8IYK4 626 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 FSIP1Q8NA03 581 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 GDPD5Q8WTR4 605 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 HDAC7Q8WUI4 952 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 POMGNT1Q8WZA1 660 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 LPPQ93052 612 aa10.74□□□□□ -0.69
NR1I3-220ENST00000505005 PABPC5Q96DU9 382 aaKnown RBP10.74□□□□□ -0.69
NR1I3-220ENST00000505005 GBP4Q96PP9 640 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms