RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 FAM217BQ9NTX9 383 aaPredicted RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 GDE1Q9NZC3 331 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 WASF3Q9UPY6 502 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 ZMYM2Q9UBW7 1377 aa6.77□□□□□ -1.33
GYPB-204ENST00000504951 MYH9P35579 1960 aaKnown RBP6.77□□□□□ -1.33
GYPB-204ENST00000504951 CEP295Q9C0D2 2601 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 hCG_1642624A0A1W2PR95 340 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 FAM86B1E9PN63 330 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 ZNF862O60290 1169 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 B4GALT3O60512 393 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 FAM86B2P0C5J1 330 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 ZNF806P0C7X5 589 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 NCLP19338 710 aaKnown RBP6.76□□□□□ -1.33
GYPB-204ENST00000504951 CIITAP33076 1130 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 DNM2P50570 870 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 AK2P54819 239 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 SETQ01105 290 aaPredicted RBP6.76□□□□□ -1.33
GYPB-204ENST00000504951 MTAPQ13126 283 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 AAMPQ13685 434 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 UBXN2BQ14CS0 331 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 UBE2SQ16763 222 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 USP41Q3LFD5 358 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 IL31Q6EBC2 164 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 TWF2Q6IBS0 349 aaKnown RBP6.76□□□□□ -1.33
GYPB-204ENST00000504951 LRSAM1Q6UWE0 723 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 MB21D2Q8IYB1 491 aaPredicted RBP6.76□□□□□ -1.33
GYPB-204ENST00000504951 EXOC8Q8IYI6 725 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 KCNV2Q8TDN2 545 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 FGF13Q92913 245 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 MSANTD3Q96H12 275 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 FAM193BQ96PV7 902 aaPredicted RBP6.76□□□□□ -1.33
GYPB-204ENST00000504951 RSAD1Q9HA92 442 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 PIDD1Q9HB75 910 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 MARCH5Q9NX47 278 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 FBXW11Q9UKB1 542 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 PPME1Q9Y570 386 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 PCDHB2Q9Y5E7 798 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 ZFYVE26Q68DK2 2539 aa6.76□□□□□ -1.33
GYPB-204ENST00000504951 MEIS3P2A8K0S8 358 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 WDR64B1ANS9 1081 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 SGSM2O43147 1006 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 PLEKHA8P1O95397 391 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 CD2BP2O95400 341 aaKnown RBP6.75□□□□□ -1.33
GYPB-204ENST00000504951 RXRAP19793 462 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 AXLP30530 894 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 HOXA11P31270 313 aaPredicted RBP6.75□□□□□ -1.33
GYPB-204ENST00000504951 SFNP31947 248 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 POU5F1BQ06416 359 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 GET4Q7L5D6 327 aaPredicted RBP6.75□□□□□ -1.33
GYPB-204ENST00000504951 TAS1R1Q7RTX1 841 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 SRGAP1Q7Z6B7 1085 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 RALYLQ86SE5 291 aaKnown RBP6.75□□□□□ -1.33
GYPB-204ENST00000504951 LONP2Q86WA8 852 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 PLA2G4DQ86XP0 818 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 RAB11FIP4Q86YS3 637 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 CKAP2LQ8IYA6 745 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 SPEM1Q8N4L4 309 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 NLRP7Q8WX94 980 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 LPPQ93052 612 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 ELSPBP1Q96BH3 223 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 CCDC51Q96ER9 411 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 TMEM87BQ96K49 555 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 RIT2Q99578 217 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 JPH2Q9BR39 696 aaPredicted RBP6.75□□□□□ -1.33
GYPB-204ENST00000504951 PHF20Q9BVI0 1012 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 COLEC11Q9BWP8 271 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 ANO3Q9BYT9 981 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 IFT122Q9HBG6 1241 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 AGPAT5Q9NUQ2 364 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 GABBR1Q9UBS5 961 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 ZMIZ1Q9ULJ6 1067 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 PCDHGA5Q9Y5G8 931 aa6.75□□□□□ -1.33
GYPB-204ENST00000504951 MYH15Q9Y2K3 1946 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 ZZEF1O43149 2961 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 ESYT2A0FGR8 921 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 TAF4O00268 1085 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 XYLBO75191 536 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 MAFO75444 373 aaPredicted RBP6.74□□□□□ -1.33
GYPB-204ENST00000504951 STBD1O95210 358 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 KCNK5O95279 499 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 ZNF76P36508 570 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 CXCL12P48061 93 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 FUT2Q10981 343 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 FOXC1Q12948 553 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 SIM2Q14190 667 aaPredicted RBP6.74□□□□□ -1.33
GYPB-204ENST00000504951 XKR3Q5GH77 459 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 PLA2G2CQ5R387 149 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 UBXN11Q5T124 520 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 PDXDC1Q6P996 788 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 B3GNT9Q6UX72 402 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 UNQ6494/PRO21346Q6UXR6 183 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 TPRG1Q6ZUI0 275 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 TMTC3Q6ZXV5 915 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 SGMS1Q86VZ5 419 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 MAP4K3Q8IVH8 894 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 SYNPOQ8N3V7 929 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 LRRC71Q8N4P6 559 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms