RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNCAIP-207ENST00000504884 PGRMC1O00264 195 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 GAS2O43903 313 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 ADCY3O60266 1144 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 CYP11B1P15538 503 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 HSP90B2PQ58FF3 399 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 WDR44Q5JSH3 913 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 IER5Q5VY09 327 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 GPAT2Q6NUI2 795 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 PLPPR4Q7Z2D5 763 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 SLC47A2Q86VL8 602 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 GLG1Q92896 1179 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 TATDN2Q93075 761 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 FGD4Q96M96 766 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 PCDHB18PQ96TA0 734 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 KRT12Q99456 494 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 GPR20Q99678 358 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 R3HDMLQ9H3Y0 253 aa16.62■□□□□ 0.25
SNCAIP-207ENST00000504884 A0A0B4J269 797 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 NOP56O00567 594 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 LGR5O75473 907 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 C4BPAP04003 597 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 TNNI1P19237 187 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 ACOT2P49753 483 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 PDE6CP51160 858 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 EFNA5P52803 228 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 NLRP11P59045 1033 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 CDR2Q01850 454 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 DMTNQ08495 405 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 ZACNQ401N2 412 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 CRELD2Q6UXH1 353 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 TARS2Q9BW92 718 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 MED4Q9NPJ6 270 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 GDF3Q9NR23 364 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 TTC7AQ9ULT0 858 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 CCDC188H7C350 402 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 ARIH2O95376 493 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 EPHB4P54760 987 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 MRPS25P82663 173 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 FMO1Q01740 532 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 SNAPC2Q13487 334 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 CAPSQ13938 189 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 LDLRAD1Q5T700 205 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 TAF3Q5VWG9 929 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 EMBQ6PCB8 327 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 ZPBP2Q6X784 338 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 MORC4Q8TE76 937 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 PRPF31Q8WWY3 499 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 ZBTB45Q96K62 511 aaPredicted RBP16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 HINFPQ9BQA5 517 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 MSTO1Q9BUK6 570 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 C1orf112Q9NSG2 853 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 CTTNBP2NLQ9P2B4 639 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 HPCAL4Q9UM19 191 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 COG5Q9UP83 839 aa16.61■□□□□ 0.25
SNCAIP-207ENST00000504884 H3BQF6 201 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 HEXIM1O94992 359 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 MMEP08473 750 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 MXD4Q14582 209 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 PTPROQ16827 1216 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 HSDL1Q3SXM5 330 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 SHCBP1Q8NEM2 672 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 SLC10A4Q96EP9 437 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 RBAKQ9NYW8 714 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-207ENST00000504884 DDX3YO15523 660 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 MTA2O94776 668 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 GLI1P08151 1106 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 SLC26A2P50443 739 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 BPIFB4P59827 614 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 ERVK-9P63128 1117 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 CLUL1Q15846 466 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 C11orf63Q6NUN7 778 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 CCDC62Q6P9F0 684 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 GSPT2Q8IYD1 628 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 FAM71BQ8TC56 605 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 CCDC102AQ96A19 550 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 JPH2Q9BR39 696 aaPredicted RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 PI4K2AQ9BTU6 479 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 CARD9Q9H257 536 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 EPB41L5Q9HCM4 733 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 NOC2LQ9Y3T9 749 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 ALG6Q9Y672 507 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 ADGRA2Q96PE1 1338 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 ASB14A6NK59 587 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 MIF4GDA9UHW6 222 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 KRIT1O00522 736 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 CLDN3O15551 220 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 HLA-DRAP01903 254 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 KRT5P13647 590 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 GUCY2DQ02846 1103 aa16.59■□□□□ 0.25
SNCAIP-207ENST00000504884 NNTQ13423 1086 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms