RNA–Protein interactions for RNA: ENST00000504858.5

NECAP2-209, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-209ENST00000504858 LINC01565O15544 149 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 PIGRP01833 764 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 STRN3Q13033 797 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 TUSC3Q13454 348 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 SMAD4Q13485 552 aaKnown RBP18.37■□□□□ 0.53
NECAP2-209ENST00000504858 RRAGBQ5VZM2 374 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 PTCRAQ6ISU1 281 aaPredicted RBP18.37■□□□□ 0.53
NECAP2-209ENST00000504858 SMRP1Q8NCR6 262 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 FIZ1Q96SL8 496 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 TARS2Q9BW92 718 aaKnown RBP18.37■□□□□ 0.53
NECAP2-209ENST00000504858 CDT1Q9H211 546 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 IGFLR1Q9H665 355 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 PRKAG3Q9UGI9 489 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 USP20Q9Y2K6 914 aa18.37■□□□□ 0.53
NECAP2-209ENST00000504858 LILRB3O75022 631 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 FAM13AO94988 1023 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 SOD2P04179 222 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 THP07101 528 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 SRGAP2BP0DMP2 458 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 LIG1P18858 919 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 NDUFV1P49821 464 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 SMAD2Q15796 467 aaKnown RBP18.36■□□□□ 0.53
NECAP2-209ENST00000504858 ZNF568Q3ZCX4 644 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 ALKAL1Q6UXT8 129 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 HAUS6Q7Z4H7 955 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 RBM23Q86U06 439 aaKnown RBP18.36■□□□□ 0.53
NECAP2-209ENST00000504858 VN1R2Q8NFZ6 395 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 COLEC11Q9BWP8 271 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 TOPORSQ9NS56 1045 aaPredicted RBP18.36■□□□□ 0.53
NECAP2-209ENST00000504858 CD207Q9UJ71 328 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 SSX2IPQ9Y2D8 614 aa18.36■□□□□ 0.53
NECAP2-209ENST00000504858 CITO14578 2027 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 TRIP11Q15643 1979 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 TNFRSF10AO00220 468 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 PER2O15055 1255 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 MBTPS2O43462 519 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 TRAK2O60296 914 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CUTAO60888 179 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 TBCAO75347 108 aaKnown RBP18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CSPG5O95196 566 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CXCL14O95715 111 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 C1RP00736 705 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
NECAP2-209ENST00000504858 GTF2BQ00403 316 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 MCL1Q07820 350 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 PKP1Q13835 747 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 PTPN14Q15678 1187 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 SV2BQ7L1I2 683 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 FAM178BQ8IXR5 827 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 PPP1R10Q96QC0 940 aaKnown RBP18.35■□□□□ 0.53
NECAP2-209ENST00000504858 HERC2P3Q9BVR0 1158 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CCDC94Q9BW85 323 aaPredicted RBP18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CUEDC2Q9H467 287 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CHST7Q9NS84 486 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 KLK14Q9P0G3 267 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 TFIP11Q9UBB9 837 aaKnown RBP18.35■□□□□ 0.53
NECAP2-209ENST00000504858 SEL1LQ9UBV2 794 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 CFAP45Q9UL16 551 aa18.35■□□□□ 0.53
NECAP2-209ENST00000504858 FRMD3A2A2Y4 597 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 TMEM189-UBE2V1I3L0A0 370 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 OR1G1P47890 313 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
NECAP2-209ENST00000504858 DHX8Q14562 1220 aaKnown RBP18.34■□□□□ 0.53
NECAP2-209ENST00000504858 NOLC1Q14978 699 aaKnown RBP eCLIP18.34■□□□□ 0.53
NECAP2-209ENST00000504858 AXDND1Q5T1B0 1012 aaPredicted RBP18.34■□□□□ 0.53
NECAP2-209ENST00000504858 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 MYCT1Q8N699 235 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 DDX12PQ92771 950 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 CASP10Q92851 521 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 DNAJC19Q96DA6 116 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 ADAM28Q9UKQ2 775 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 TBX20Q9UMR3 447 aa18.34■□□□□ 0.53
NECAP2-209ENST00000504858 PRG3Q9Y2Y8 225 aaPredicted RBP18.34■□□□□ 0.53
NECAP2-209ENST00000504858 A0A087X0B3 334 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 CLASP2O75122 1294 aaKnown RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 IL9P15248 144 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 KCNE1P15382 129 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 YARSP54577 528 aaKnown RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 DSG1Q02413 1049 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 HSP90AA2PQ14568 343 aaPredicted RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 E2F4Q16254 413 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 KYAT1Q16773 422 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 EP400NLQ6ZTU2 488 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 MAP4K3Q8IVH8 894 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 CEP120Q8N960 986 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 HVCN1Q96D96 273 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 ACAP3Q96P50 834 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 STRA6Q9BX79 667 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 OLFML3Q9NRN5 406 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 MRPL17Q9NRX2 175 aaKnown RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 CNTN3Q9P232 1028 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 RCOR1Q9UKL0 485 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 BARX2Q9UMQ3 279 aaPredicted RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 GDAQ9Y2T3 454 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 HCFC2Q9Y5Z7 792 aa18.33■□□□□ 0.52
NECAP2-209ENST00000504858 PDCD11Q14690 1871 aaKnown RBP18.33■□□□□ 0.52
NECAP2-209ENST00000504858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms