RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 DEF6Q9H4E7 631 aa14.39□□□□□ -0.11
LMNA-220ENST00000504687 RAB20Q9NX57 234 aa14.39□□□□□ -0.11
LMNA-220ENST00000504687 RBAKQ9NYW8 714 aaPredicted RBP14.39□□□□□ -0.11
LMNA-220ENST00000504687 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
LMNA-220ENST00000504687 R3HCC1Q9Y3T6 440 aaKnown RBP14.39□□□□□ -0.11
LMNA-220ENST00000504687 PCDHA13Q9Y5I0 950 aa14.39□□□□□ -0.11
LMNA-220ENST00000504687 PLEKP08567 350 aaPredicted RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 MCF2P10911 925 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 PSEN2P49810 448 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 SP3Q02447 781 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 MFSD10Q14728 455 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 TDRD12Q587J7 1177 aaKnown RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 ATF7IP2Q5U623 682 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 VPS36Q86VN1 386 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 WDR49Q8IV35 697 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 LMBR1Q8WVP7 490 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 FAXDC2Q96IV6 333 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 ZBTB45Q96K62 511 aaPredicted RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 NLRP4Q96MN2 994 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 FNBP1Q96RU3 617 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 IFIH1Q9BYX4 1025 aaKnown RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 AJAP1Q9UKB5 411 aaPredicted RBP14.38□□□□□ -0.11
LMNA-220ENST00000504687 INTUQ9ULD6 942 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 SCN10AQ9Y5Y9 1956 aa14.38□□□□□ -0.11
LMNA-220ENST00000504687 SEPT4O43236 478 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 EVI5O60447 810 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 B4GALT4O60513 344 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 RPLP2P05387 115 aaKnown RBP14.37□□□□□ -0.11
LMNA-220ENST00000504687 GNAT1P11488 350 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 FLT3LGP49771 235 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 MFAP3P55082 362 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 GNG11P61952 73 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 IGBP1P78318 339 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 PURAQ00577 322 aaKnown RBP14.37□□□□□ -0.11
LMNA-220ENST00000504687 PTK2Q05397 1052 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 FSCN1Q16658 493 aaKnown RBP14.37□□□□□ -0.11
LMNA-220ENST00000504687 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 NFRKBQ6P4R8 1299 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 KIAA1328Q86T90 577 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 NME8Q8N427 588 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 RNF10Q8N5U6 811 aaKnown RBP14.37□□□□□ -0.11
LMNA-220ENST00000504687 TRPV1Q8NER1 839 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 SLC30A5Q8TAD4 765 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 HELQQ8TDG4 1101 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 TRIB2Q92519 343 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 SHC3Q92529 594 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 ZNF516Q92618 1163 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 CCDC127Q96BQ5 260 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 ADAMTS10Q9H324 1103 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 DNAI1Q9UI46 699 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 RALGAPA2Q2PPJ7 1873 aa14.37□□□□□ -0.11
LMNA-220ENST00000504687 A0A087WZ62 844 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 INO80B-WBP1J3KQ70 363 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 IL18RAPO95256 599 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
LMNA-220ENST00000504687 HOXD10P28358 340 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 CASQ1P31415 396 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 MAGEA1P43355 309 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 ACOT2P49753 483 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 MAP2K1Q02750 393 aaPredicted RBP14.36□□□□□ -0.11
LMNA-220ENST00000504687 NAB2Q15742 525 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 ZNF571Q7Z3V5 609 aaPredicted RBP14.36□□□□□ -0.11
LMNA-220ENST00000504687 TAS1R2Q8TE23 839 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 SEMA4DQ92854 862 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 WDR24Q96S15 920 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 FDXACB1Q9BRP7 624 aaPredicted RBP14.36□□□□□ -0.11
LMNA-220ENST00000504687 INO80BQ9C086 356 aaPredicted RBP14.36□□□□□ -0.11
LMNA-220ENST00000504687 CDT1Q9H211 546 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 MINDY3Q9H8M7 445 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 UBE2TQ9NPD8 197 aaPredicted RBP14.36□□□□□ -0.11
LMNA-220ENST00000504687 LZTFL1Q9NQ48 299 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 ANKFY1Q9P2R3 1169 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 GABRQQ9UN88 632 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 AKT3Q9Y243 479 aa14.36□□□□□ -0.11
LMNA-220ENST00000504687 A0A087X0T9 212 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 ANO9A1A5B4 782 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 FANCGO15287 622 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 GPR32O75388 356 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 GJB1P08034 283 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 CLTAP09496 248 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 IQCF3P0C7M6 154 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 FAM228BP0C875 321 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 DLATP10515 647 aaKnown RBP14.35□□□□□ -0.11
LMNA-220ENST00000504687 AXLP30530 894 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 ZNF568Q3ZCX4 644 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 GJB7Q6PEY0 223 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 APBB1IPQ7Z5R6 666 aaPredicted RBP14.35□□□□□ -0.11
LMNA-220ENST00000504687 SESTD1Q86VW0 696 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 NT5DC4Q86YG4 428 aa14.35□□□□□ -0.11
LMNA-220ENST00000504687 ARHGEF19Q8IW93 802 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms