RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TGFB3P10600 412 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 CYP11B1P15538 503 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 TCF7P36402 384 aaPredicted RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 CLDN10P78369 228 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 PSMD6Q15008 389 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 CALR3Q96L12 384 aaKnown RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 RBPJLQ9UBG7 517 aa24.23■■□□□ 1.47
PCDH1-204ENST00000503492 AGO2Q9UKV8 859 aaKnown RBP24.23■■□□□ 1.47
PCDH1-204ENST00000503492 SOCS7O14512 581 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 ARIH2O95376 493 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 GZMAP12544 262 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 RFC5P40937 340 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 ACOT2P49753 483 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 GPC5P78333 572 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 TTLL12Q14166 644 aaPredicted RBP24.22■■□□□ 1.47
PCDH1-204ENST00000503492 TCEAL1Q15170 157 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 Q3C1V9 767 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 EMBQ6PCB8 327 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 METTL7BQ6UX53 244 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 CRELD2Q6UXH1 353 aaPredicted RBP24.22■■□□□ 1.47
PCDH1-204ENST00000503492 AFAP1L1Q8TED9 768 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 SEPT1Q8WYJ6 367 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 ADAM21Q9UKJ8 722 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 EDN1P05305 212 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 MOGSQ13724 837 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 FAM160B1Q5W0V3 765 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 TARS2Q9BW92 718 aaKnown RBP24.22■■□□□ 1.47
PCDH1-204ENST00000503492 CTTNBP2NLQ9P2B4 639 aa24.22■■□□□ 1.47
PCDH1-204ENST00000503492 PHACTR2O75167 634 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 SLC25A27O95847 323 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 DCAF12L1Q5VU92 463 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.21■■□□□ 1.47
PCDH1-204ENST00000503492 AGPSO00116 658 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 SCP2P22307 547 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 NF2P35240 595 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 PPIL2Q13356 520 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 DRP2Q13474 957 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 CASKIN2Q8WXE0 1202 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 CAVIN3Q969G5 261 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 CHORDC1Q9UHD1 332 aaPredicted RBP24.21■■□□□ 1.47
PCDH1-204ENST00000503492 NFU1Q9UMS0 254 aa24.21■■□□□ 1.47
PCDH1-204ENST00000503492 ITGA4P13612 1032 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 YBX3P16989 372 aaKnown RBP eCLIP24.2■■□□□ 1.46
PCDH1-204ENST00000503492 CDR2Q01850 454 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 GCNT1Q02742 428 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 CAPSQ13938 189 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 TRADDQ15628 312 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 DDX1Q92499 740 aaKnown RBP24.2■■□□□ 1.46
PCDH1-204ENST00000503492 PTPRJQ12913 1337 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 KRIT1O00522 736 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 KIAA0391O15091 583 aaKnown RBP24.2■■□□□ 1.46
PCDH1-204ENST00000503492 ZC3H11AO75152 810 aaKnown RBP eCLIP24.2■■□□□ 1.46
PCDH1-204ENST00000503492 C4BPAP04003 597 aaKnown RBP24.2■■□□□ 1.46
PCDH1-204ENST00000503492 GGCXP38435 758 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 PDE6CP51160 858 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 ZACNQ401N2 412 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 ZBTB41Q5SVQ8 909 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 IFT81Q8WYA0 676 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 RIN2Q8WYP3 895 aaPredicted RBP24.2■■□□□ 1.46
PCDH1-204ENST00000503492 FNBP1Q96RU3 617 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 ALG6Q9Y672 507 aa24.2■■□□□ 1.46
PCDH1-204ENST00000503492 ZNFX1Q9P2E3 1918 aaKnown RBP24.19■■□□□ 1.46
PCDH1-204ENST00000503492 TNNI1P19237 187 aa24.19■■□□□ 1.46
PCDH1-204ENST00000503492 CYP2C19P33261 490 aa24.19■■□□□ 1.46
PCDH1-204ENST00000503492 SLFN12LQ6IEE8 588 aa24.19■■□□□ 1.46
PCDH1-204ENST00000503492 C11orf63Q6NUN7 778 aa24.19■■□□□ 1.46
PCDH1-204ENST00000503492 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.19■■□□□ 1.46
PCDH1-204ENST00000503492 TSEN2Q8NCE0 465 aaKnown RBP24.19■■□□□ 1.46
PCDH1-204ENST00000503492 OPTNQ96CV9 577 aa24.19■■□□□ 1.46
PCDH1-204ENST00000503492 TMEM134Q9H6X4 195 aa24.19■■□□□ 1.46
PCDH1-204ENST00000503492 TTC7AQ9ULT0 858 aaPredicted RBP24.19■■□□□ 1.46
PCDH1-204ENST00000503492 ATMINO43313 823 aaPredicted RBP24.18■■□□□ 1.46
PCDH1-204ENST00000503492 MAFO75444 373 aaPredicted RBP24.18■■□□□ 1.46
PCDH1-204ENST00000503492 TDRD10Q5VZ19 366 aaKnown RBP24.18■■□□□ 1.46
PCDH1-204ENST00000503492 DDX47Q9H0S4 455 aaKnown RBP24.18■■□□□ 1.46
PCDH1-204ENST00000503492 ANKFY1Q9P2R3 1169 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 CCDC188H7C350 402 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 SART1O43290 800 aaKnown RBP24.18■■□□□ 1.46
PCDH1-204ENST00000503492 GRIN3BO60391 1043 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 CALCAP01258 141 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 HLA-DRAP01903 254 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 FAM153BP0C7A2 387 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 PAK2Q13177 524 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 FAM153CQ494X1 144 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 ENOSF1Q7L5Y1 443 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 C1orf112Q9NSG2 853 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 FAM153AQ9UHL3 310 aa24.18■■□□□ 1.46
PCDH1-204ENST00000503492 DIS3Q9Y2L1 958 aaKnown RBP24.18■■□□□ 1.46
PCDH1-204ENST00000503492 DNAJC25-GNG10A0A024R161 153 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 A0A0B4J269 797 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 ADCY3O60266 1144 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 KRT5P13647 590 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 HSDL1Q3SXM5 330 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 ALG3Q92685 438 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 GPR20Q99678 358 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 MSTO1Q9BUK6 570 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 ZMYND15Q9H091 742 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 CARD9Q9H257 536 aa24.17■■□□□ 1.46
PCDH1-204ENST00000503492 RBAKQ9NYW8 714 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms