RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 ZNF568Q3ZCX4 644 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 PLPP4Q5VZY2 271 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 EEF1DP3Q658K8 133 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 SV2BQ7L1I2 683 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 TMC7Q7Z402 723 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 HAUS6Q7Z4H7 955 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 ADGRD2Q7Z7M1 963 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 TMEM173Q86WV6 379 aaPredicted RBP9.63□□□□□ -0.87
RNF4-203ENST00000503123 GPR65Q8IYL9 337 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 VPS52Q8N1B4 723 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 MRPL43Q8N983 215 aaKnown RBP9.63□□□□□ -0.87
RNF4-203ENST00000503123 ADAMTS19Q8TE59 1207 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 APOL6Q9BWW8 343 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 CDT1Q9H211 546 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 TOPORSQ9NS56 1045 aaPredicted RBP9.63□□□□□ -0.87
RNF4-203ENST00000503123 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 SNTG2Q9NY99 539 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
RNF4-203ENST00000503123 PARP2Q9UGN5 583 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 TSC2P49815 1807 aa9.63□□□□□ -0.87
RNF4-203ENST00000503123 GRXCR2A6NFK2 248 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 C2orf71A6NGG8 1288 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 PTGESO14684 152 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 TRAK2O60296 914 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 GLP2RO95838 553 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 SOD2P04179 222 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 GAP43P17677 238 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 GTF2BQ00403 316 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 MCL1Q07820 350 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 COASYQ13057 564 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 PKP1Q13835 747 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 DHX8Q14562 1220 aaKnown RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
RNF4-203ENST00000503123 NAB2Q15742 525 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 KYAT1Q16773 422 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 XKR4Q5GH76 650 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 AXDND1Q5T1B0 1012 aaPredicted RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 ALKAL1Q6UXT8 129 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 FAM178BQ8IXR5 827 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 RNF168Q8IYW5 571 aaPredicted RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 SMRP1Q8NCR6 262 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 BCL7CQ8WUZ0 217 aaPredicted RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 DDX12PQ92771 950 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 HVCN1Q96D96 273 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 DNAJC19Q96DA6 116 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 MSLNLQ96KJ4 702 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 FIZ1Q96SL8 496 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 PYM1Q9BRP8 204 aaKnown RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 CCDC94Q9BW85 323 aaPredicted RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 TARS2Q9BW92 718 aaKnown RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 COLEC11Q9BWP8 271 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 VN1R3Q9BXE9 311 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 LRRC27Q9C0I9 530 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 TNMDQ9H2S6 317 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 MAGEF1Q9HAY2 307 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 MARCH5Q9NX47 278 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 RCOR1Q9UKL0 485 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 TBX20Q9UMR3 447 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 SSX2IPQ9Y2D8 614 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 ATP6V1DQ9Y5K8 247 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.62□□□□□ -0.87
RNF4-203ENST00000503123 DENND4CQ5VZ89 1909 aa9.62□□□□□ -0.87
RNF4-203ENST00000503123 A0A087X0B3 334 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 FRMD3A2A2Y4 597 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 MYMKA6NI61 221 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 HIDE1A8MVS5 230 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 TMEM189-UBE2V1I3L0A0 370 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 K7ENM7 598 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 HNRNPDLO14979 420 aaKnown RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 CLDN3O15551 220 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 C1RP00736 705 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 HOXB8P17481 243 aaPredicted RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 GTF2F1P35269 517 aaKnown RBP eCLIP9.61□□□□□ -0.87
RNF4-203ENST00000503123 OR1G1P47890 313 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 NDUFV1P49821 464 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 YARSP54577 528 aaKnown RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 CACNB1Q02641 598 aaPredicted RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 DLX2Q07687 328 aaPredicted RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 SMAD4Q13485 552 aaKnown RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 HSP90AA2PQ14568 343 aaPredicted RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 PTPN14Q15678 1187 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 SMAD2Q15796 467 aaKnown RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 E2F4Q16254 413 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 CNNM4Q6P4Q7 775 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 RBM23Q86U06 439 aaKnown RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 MAP4K3Q8IVH8 894 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 UROC1Q96N76 676 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 PPP1R10Q96QC0 940 aaKnown RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 TSPAN18Q96SJ8 248 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 UHRF1Q96T88 793 aaPredicted RBP9.61□□□□□ -0.87
RNF4-203ENST00000503123 TCHPQ9BT92 498 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 HERC2P3Q9BVR0 1158 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 IGFLR1Q9H665 355 aa9.61□□□□□ -0.87
RNF4-203ENST00000503123 SLC38A7Q9NVC3 462 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms