RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 A6NJR5 290 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 BTNL10A8MVZ5 291 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 TULP1O00294 542 aaPredicted RBP23.78■■□□□ 1.4
PTPN13-205ENST00000502971 ADCY6O43306 1168 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 LRRN2O75325 713 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 ZNF865P0CJ78 1059 aaPredicted RBP23.78■■□□□ 1.4
PTPN13-205ENST00000502971 PHKA2P46019 1235 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 HTRA3P83110 453 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 MCL1Q07820 350 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 PRAMEF19Q5SWL8 479 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 ALKBH5Q6P6C2 394 aaKnown RBP23.78■■□□□ 1.4
PTPN13-205ENST00000502971 MTHFD1LQ6UB35 978 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 IFNLR1Q8IU57 520 aaPredicted RBP23.78■■□□□ 1.4
PTPN13-205ENST00000502971 TSC1Q92574 1164 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 ZNF516Q92618 1163 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 ALS2CR12Q96Q35 445 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 CGRRF1Q99675 332 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 APBA2Q99767 749 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 CARD6Q9BX69 1037 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 THSD7BQ9C0I4 1608 aa23.78■■□□□ 1.4
PTPN13-205ENST00000502971 DYNC1LI2O43237 492 aaPredicted RBP23.77■■□□□ 1.4
PTPN13-205ENST00000502971 C4BPAP04003 597 aaKnown RBP23.77■■□□□ 1.4
PTPN13-205ENST00000502971 TNNI1P19237 187 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 MBTD1Q05BQ5 628 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 PPFIA1Q13136 1202 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 KIAA0753Q2KHM9 967 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 ZACNQ401N2 412 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 SLC30A5Q8TAD4 765 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 NOX5Q96PH1 765 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 SYT11Q9BT88 431 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 TCHPQ9BT92 498 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 PDE11AQ9HCR9 933 aa23.77■■□□□ 1.4
PTPN13-205ENST00000502971 TTLL13PA6NNM8 815 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 INO80B-WBP1J3KQ70 363 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 DDX3XO00571 662 aaKnown RBP eCLIP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 ABLIM1O14639 778 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 TNPO2O14787 897 aaKnown RBP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 OGTO15294 1046 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 ECM2O94769 699 aaPredicted RBP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 GJB1P08034 283 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 PROZP22891 400 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 AMPD2Q01433 879 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 PRPF4BQ13523 1007 aaKnown RBP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 GRIK4Q16099 956 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 FAM187BQ17R55 369 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 PAPD7Q5XG87 772 aaKnown RBP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 ENOSF1Q7L5Y1 443 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 BRSK2Q8IWQ3 736 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 PPM1KQ8N3J5 372 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 HELQQ8TDG4 1101 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 ZBTB10Q96DT7 871 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 INO80BQ9C086 356 aaPredicted RBP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 PRMT7Q9NVM4 692 aaPredicted RBP23.76■■□□□ 1.39
PTPN13-205ENST00000502971 INTUQ9ULD6 942 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 CNTNAP2Q9UHC6 1331 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 RRN3P2A6NIE6 340 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 FAM189A1O60320 539 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 CYP2B6P20813 491 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 AP3M2P53677 418 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 ZBTB41Q5SVQ8 909 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 MPZL3Q6UWV2 235 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 PTPRHQ9HD43 1115 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 RNF186Q9NXI6 227 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 Q9Y3F1 56 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 JRKLQ9Y4A0 524 aa23.76■■□□□ 1.39
PTPN13-205ENST00000502971 EFCAB8A8MWE9 144 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 MGAMO43451 1857 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 MOCS3O95396 460 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 IGHA2P01877 340 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 NCBP1Q09161 790 aaKnown RBP23.75■■□□□ 1.39
PTPN13-205ENST00000502971 SURF1Q15526 300 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 WHAMMP3Q1A5X7 153 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 ATF7IP2Q5U623 682 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 TRAPPC11Q7Z392 1133 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 FAM71AQ8IYT1 594 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 CEP112Q8N8E3 955 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 LNX1Q8TBB1 728 aaPredicted RBP23.75■■□□□ 1.39
PTPN13-205ENST00000502971 SHC3Q92529 594 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 KREMEN1Q96MU8 473 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 IFT122Q9HBG6 1241 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 AKT3Q9Y243 479 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 TNFSF13BQ9Y275 285 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 CAPN6Q9Y6Q1 641 aa23.75■■□□□ 1.39
PTPN13-205ENST00000502971 PCNTO95613 3336 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 HARSP12081 509 aaKnown RBP23.74■■□□□ 1.39
PTPN13-205ENST00000502971 TNFAIP3P21580 790 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 CYP2C19P33261 490 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 WNT7BP56706 349 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 CCL14Q16627 93 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 ZBTB33Q86T24 672 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 TLK2Q86UE8 772 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 OLIG1Q8TAK6 271 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 MAP7D2Q96T17 732 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 SAGE1Q9NXZ1 904 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 DOCK3Q8IZD9 2030 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 ZSWIM8A7E2V4 1837 aa23.74■■□□□ 1.39
PTPN13-205ENST00000502971 TRPA1O75762 1119 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 ATP1A1P05023 1023 aaKnown RBP23.73■■□□□ 1.39
PTPN13-205ENST00000502971 GCNT1Q02742 428 aa23.73■■□□□ 1.39
PTPN13-205ENST00000502971 WDR44Q5JSH3 913 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms