RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 MBD1Q9UIS9 605 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 OGDHLQ9ULD0 1010 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 PADI4Q9UM07 663 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 USP19O94966 1318 aa6.48□□□□□ -1.37
HMGB1P3-201ENST00000502802 MYO1FO00160 1098 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 PIP5K1CO60331 668 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 AMY1AP04745 511 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 KITP10721 976 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 SMARCA1P28370 1054 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 SLC7A1P30825 629 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 MLLT6P55198 1093 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 WNT3AP56704 352 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 ZNF543Q08ER8 600 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 TOP3AQ13472 1001 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 CNGA2Q16280 664 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 IZUMO3Q5VZ72 239 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 TMEM132EQ6IEE7 984 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 TRMT10BQ6PF06 316 aaKnown RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 MPZL3Q6UWV2 235 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 SMAP1Q8IYB5 467 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 MZB1Q8WU39 189 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 NOX5Q96PH1 765 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 UNKQ9C0B0 810 aaKnown RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 WDCPQ9H6R7 721 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 SARS2Q9NP81 518 aaKnown RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 CNNM1Q9NRU3 951 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 LANCL2Q9NS86 450 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 LUZP4Q9P127 313 aa6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 MORC2Q9Y6X9 1032 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P3-201ENST00000502802 MYOCOSA0A1B0GUC4 107 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 NCK2O43639 380 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 HYAL3O43820 417 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 ALDH1A2O94788 518 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 GASTP01350 101 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 HMGCRP04035 888 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 FTH1P19P0C7X4 201 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 BRAFP15056 766 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 DDCP20711 480 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 ABCB4P21439 1286 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 CRHR1P34998 444 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 PPM1AP35813 382 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 STT3AP46977 705 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 PPM1FP49593 454 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 FMO1Q01740 532 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 TNFAIP2Q03169 654 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 LRP8Q14114 963 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 TRIM14Q14142 442 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 TRIM68Q6AZZ1 485 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 TMED8Q6PL24 325 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 CLEC14AQ86T13 490 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 IGDCC3Q8IVU1 814 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 RTKN2Q8IZC4 609 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 CPXCR1Q8N123 301 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZGPATQ8N5A5 531 aaKnown RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 PNISRQ8TF01 805 aaKnown RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 KIAA1191Q96A73 305 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZBTB8AQ96BR9 441 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZC3H10Q96K80 434 aaKnown RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 SENP6Q9GZR1 1112 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 PNPLA8Q9NP80 782 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 GPRC5DQ9NZD1 345 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 CPA4Q9UI42 421 aa6.46□□□□□ -1.38
HMGB1P3-201ENST00000502802 TEX51A0A1B0GUA7 166 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 POM121BA6NF01 834 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 DDX3XO00571 662 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 PAPLNO95428 1278 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 NPR1P16066 1061 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 IL6STP40189 918 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 ETV4P43268 484 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 ATP8B2P98198 1209 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 ADAM15Q13444 863 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 SMAD4Q13485 552 aaKnown RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 DAG1Q14118 895 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 RALBP1Q15311 655 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 PDCD2Q16342 344 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 FLYWCH1Q4VC44 716 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 KHDC1LQ5JSQ8 128 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 SAPCD2Q86UD0 394 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 NKAPQ8N5F7 415 aaKnown RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 PLA2G15Q8NCC3 412 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 BRIX1Q8TDN6 353 aaKnown RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 BRI3BPQ8WY22 251 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 SUCLG2Q96I99 432 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 SCLT1Q96NL6 688 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 MCOLN1Q9GZU1 580 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 LDAHQ9H6V9 325 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 TMEM140Q9NV12 185 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 GNL3LQ9NVN8 582 aaKnown RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 PIH1D1Q9NWS0 290 aaKnown RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 CDC23Q9UJX2 597 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 AJAP1Q9UKB5 411 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 PCDHA6Q9UN73 950 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 PCDHA1Q9Y5I3 950 aa6.45□□□□□ -1.38
HMGB1P3-201ENST00000502802 C2orf78A6NCI8 922 aa6.44□□□□□ -1.38
HMGB1P3-201ENST00000502802 ZNF503-AS2A6NEH8 195 aa6.44□□□□□ -1.38
HMGB1P3-201ENST00000502802 NT5C1B-RDH14C9J2C7 533 aa6.44□□□□□ -1.38
HMGB1P3-201ENST00000502802 GPR32O75388 356 aa6.44□□□□□ -1.38
HMGB1P3-201ENST00000502802 ITGA10O75578 1167 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms