RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 PARP2Q9UGN5 583 aa15.5■□□□□ 0.07
CCDC58-207ENST00000498466 FBXW11Q9UKB1 542 aa15.5■□□□□ 0.07
CCDC58-207ENST00000498466 POLIQ9UNA4 740 aa15.5■□□□□ 0.07
CCDC58-207ENST00000498466 MTF2Q9Y483 593 aaPredicted RBP15.5■□□□□ 0.07
CCDC58-207ENST00000498466 DOCK8Q8NF50 2099 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 FAM170BA6NMN3 283 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 CPLX1O14810 134 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 ZBTB39O15060 712 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 C8AP07357 584 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 HNRNPA1P09651 372 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 ARF4P18085 180 aaPredicted RBP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 SDHBP21912 280 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 HSPA4P34932 840 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 PFKPQ01813 784 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 CYP4A11Q02928 519 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 MBTD1Q05BQ5 628 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 CTTNQ14247 550 aaKnown RBP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 HSP90AA2PQ14568 343 aaPredicted RBP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 NPY5RQ15761 445 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 CDR2LQ86X02 465 aaPredicted RBP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 CEP57Q86XR8 500 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 GSTCDQ8NEC7 633 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 HASPINQ8TF76 798 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 FGF13Q92913 245 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 DYDC2Q96IM9 177 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 DDX23Q9BUQ8 820 aaKnown RBP15.49■□□□□ 0.07
CCDC58-207ENST00000498466 ZSWIM4Q9H7M6 989 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 CACNG4Q9UBN1 327 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 PCDHGA2Q9Y5H1 932 aa15.49■□□□□ 0.07
CCDC58-207ENST00000498466 NCOR2Q9Y618 2525 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 OTOGLQ3ZCN5 2332 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 CCDC194A0A1B0GVG4 234 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 CCL16O15467 120 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 CCNT1O60563 726 aaKnown RBP15.48■□□□□ 0.07
CCDC58-207ENST00000498466 XYLBO75191 536 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 NPTXRO95502 500 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 CD72P21854 359 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 PSMA5P28066 241 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 EVCP57679 992 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 AMHR2Q16671 573 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 PPP4R3AQ6IN85 833 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 SLC27A1Q6PCB7 646 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 NEK8Q86SG6 692 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 TPH2Q8IWU9 490 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 GPR161Q8N6U8 529 aaKnown RBP15.48■□□□□ 0.07
CCDC58-207ENST00000498466 ITFG1Q8TB96 612 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 AIFM3Q96NN9 605 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 KXD1Q9BQD3 176 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 PAAF1Q9BRP4 392 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 TTPALQ9BTX7 342 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 OSBPL6Q9BZF3 934 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 LTB4R2Q9NPC1 389 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 XPNPEP1Q9NQW7 623 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 ZFHX4Q86UP3 3567 aa15.48■□□□□ 0.07
CCDC58-207ENST00000498466 CASTOR2A6NHX0 329 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 B4GALT5O43286 388 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 KRT37O76014 449 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 GCFC2P16383 781 aaKnown RBP15.47■□□□□ 0.07
CCDC58-207ENST00000498466 HOXA9P31269 272 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 MAGEA9P43362 315 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 POU5F1BQ06416 359 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 CAPSQ13938 189 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 PSMD5Q16401 504 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 ZBTB41Q5SVQ8 909 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 FAM171A1Q5VUB5 890 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 RSPO2Q6UXX9 243 aaPredicted RBP15.47■□□□□ 0.07
CCDC58-207ENST00000498466 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
CCDC58-207ENST00000498466 FAM177A1Q8N128 213 aaPredicted RBP15.47■□□□□ 0.07
CCDC58-207ENST00000498466 ASAP3Q8TDY4 903 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 HAS1Q92839 578 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 CLSTN3Q9BQT9 956 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 PHF20Q9BVI0 1012 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 ZSCAN32Q9NX65 697 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 CDV3Q9UKY7 258 aaKnown RBP15.47■□□□□ 0.07
CCDC58-207ENST00000498466 KCNJ14Q9UNX9 436 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 SMG5Q9UPR3 1016 aaKnown RBP15.47■□□□□ 0.07
CCDC58-207ENST00000498466 COL4A3Q01955 1670 aa15.47■□□□□ 0.07
CCDC58-207ENST00000498466 TBX3O15119 743 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 KIF4AO95239 1232 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 ATXN1P54253 815 aaKnown RBP15.46■□□□□ 0.07
CCDC58-207ENST00000498466 TUSC3Q13454 348 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 CPLX2Q6PUV4 134 aaKnown RBP15.46■□□□□ 0.07
CCDC58-207ENST00000498466 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.07
CCDC58-207ENST00000498466 SLC7A14Q8TBB6 771 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 PIK3R5Q8WYR1 880 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 CCDC43Q96MW1 224 aaKnown RBP15.46■□□□□ 0.07
CCDC58-207ENST00000498466 ZMYM2Q9UBW7 1377 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 FANCMQ8IYD8 2048 aa15.46■□□□□ 0.07
CCDC58-207ENST00000498466 CEP250Q9BV73 2442 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 TDRD15B5MCY1 1934 aaKnown RBP15.45■□□□□ 0.06
CCDC58-207ENST00000498466 MTCL1Q9Y4B5 1905 aaKnown RBP15.45■□□□□ 0.06
CCDC58-207ENST00000498466 A0A1B0GUA9 196 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 PRR5-ARHGAP8B1AHC4 643 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 NCAM2O15394 837 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 DGAT1O75907 488 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 ARL2P36404 184 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 ARHGAP8P85298 464 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 LMNB2Q03252 620 aa15.45■□□□□ 0.06
CCDC58-207ENST00000498466 TOB2Q14106 344 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms