RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 IGDCC4Q8TDY8 1250 aa9.75□□□□□ -0.85
SNX13-212ENST00000498463 USP13Q92995 863 aaPredicted RBP9.75□□□□□ -0.85
SNX13-212ENST00000498463 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
SNX13-212ENST00000498463 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
SNX13-212ENST00000498463 SARS2Q9NP81 518 aaKnown RBP9.75□□□□□ -0.85
SNX13-212ENST00000498463 GJB4Q9NTQ9 266 aa9.75□□□□□ -0.85
SNX13-212ENST00000498463 LRFN1Q9P244 771 aa9.75□□□□□ -0.85
SNX13-212ENST00000498463 PCDHA6Q9UN73 950 aa9.75□□□□□ -0.85
SNX13-212ENST00000498463 F8W031 263 aaPredicted RBP9.74□□□□□ -0.85
SNX13-212ENST00000498463 EYA2O00167 538 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 ACKR2O00590 384 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 ENO2P09104 434 aaPredicted RBP9.74□□□□□ -0.85
SNX13-212ENST00000498463 MALP21145 153 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 ECHS1P30084 290 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 ARL4AP40617 200 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 ARL4CP56559 192 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 MEF2AQ02078 507 aaPredicted RBP9.74□□□□□ -0.85
SNX13-212ENST00000498463 RASSF7Q02833 373 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 TLE1Q04724 770 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 C1orf122Q6ZSJ8 110 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 MIB1Q86YT6 1006 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 IFI44Q8TCB0 444 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 MUL1Q969V5 352 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 ZSCAN31Q96LW9 406 aaPredicted RBP9.74□□□□□ -0.85
SNX13-212ENST00000498463 JADE2Q9NQC1 790 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 PIH1D1Q9NWS0 290 aaKnown RBP9.74□□□□□ -0.85
SNX13-212ENST00000498463 DACT1Q9NYF0 836 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 COL20A1Q9P218 1284 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 DBR1Q9UK59 544 aaKnown RBP9.74□□□□□ -0.85
SNX13-212ENST00000498463 SLC39A10Q9ULF5 831 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 PCDHA1Q9Y5I3 950 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 RPTORQ8N122 1335 aa9.74□□□□□ -0.85
SNX13-212ENST00000498463 A0A1W2PR48 441 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 MAFO75444 373 aaPredicted RBP9.73□□□□□ -0.85
SNX13-212ENST00000498463 MBD4O95243 580 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 FSTP19883 344 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 ADSLP30566 484 aaPredicted RBP9.73□□□□□ -0.85
SNX13-212ENST00000498463 RXRGP48443 463 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 GRM1Q13255 1194 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 G3BP1Q13283 466 aaKnown RBP eCLIP9.73□□□□□ -0.85
SNX13-212ENST00000498463 SNAPC2Q13487 334 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 TAF5Q15542 800 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 TAF12Q16514 161 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 MST1LQ2TV78 715 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 TIGD5Q53EQ6 642 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 C3orf38Q5JPI3 329 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 KHDC1LQ5JSQ8 128 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 KANK2Q63ZY3 851 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 ZNF280DQ6N043 979 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 LIPIQ6XZB0 460 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 GADL1Q6ZQY3 521 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 Q6ZVL8 140 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 FANCBQ8NB91 859 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 PPP1R14CQ8TAE6 165 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 BRIX1Q8TDN6 353 aaKnown RBP9.73□□□□□ -0.85
SNX13-212ENST00000498463 DYDC2Q96IM9 177 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 SORBS1Q9BX66 1292 aaKnown RBP9.73□□□□□ -0.85
SNX13-212ENST00000498463 WDCPQ9H6R7 721 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 OBP2BQ9NPH6 170 aa9.73□□□□□ -0.85
SNX13-212ENST00000498463 LGALS16A8MUM7 142 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 C1QTNF9BB2RNN3 333 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 hCG_1984214I3L0E3 225 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 NPC1O15118 1278 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 STAT5AP42229 794 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 ITGA8P53708 1063 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 FOXO1Q12778 655 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 DGKDQ16760 1214 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 VASNQ6EMK4 673 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 FAM180BQ6P0A1 224 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 PPP1R3BQ86XI6 285 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 ZDHHC13Q8IUH4 622 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 MSL3Q8N5Y2 521 aaKnown RBP9.72□□□□□ -0.85
SNX13-212ENST00000498463 CCDC89Q8N998 374 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 WDR48Q8TAF3 677 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 IQCDQ96DY2 449 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 TSPAN17Q96FV3 270 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 PDCD2LQ9BRP1 358 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 ADAM7Q9H2U9 754 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 SACM1LQ9NTJ5 587 aa9.72□□□□□ -0.85
SNX13-212ENST00000498463 SYT5O00445 386 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 IRAK2O43187 625 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 PRAMEF4O60810 478 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 LY86O95711 162 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 PNLIPP16233 465 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.86
SNX13-212ENST00000498463 RPS16P62249 146 aaKnown RBP9.71□□□□□ -0.86
SNX13-212ENST00000498463 IL13RA1P78552 427 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 MPP1Q00013 466 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 BNIP3Q12983 259 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 STILQ15468 1287 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 RETSATQ6NUM9 610 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 JMJD6Q6NYC1 403 aaPredicted RBP9.71□□□□□ -0.86
SNX13-212ENST00000498463 ABHD15Q6UXT9 468 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 CCHCR1Q8TD31 782 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 P2RX7Q99572 595 aaKnown RBP9.71□□□□□ -0.86
SNX13-212ENST00000498463 TRIM54Q9BYV2 358 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 VPS45Q9NRW7 570 aa9.71□□□□□ -0.86
SNX13-212ENST00000498463 RASSF1Q9NS23 344 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms