RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 IGKV3D-20A0A0C4DH25 116 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 NEURL1BA8MQ27 555 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ARHGEF33A8MVX0 844 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CYP27B1O15528 508 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CCP110O43303 1012 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 CST8O60676 142 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ALOX12P18054 663 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 IGFBP4P22692 258 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 BRD2P25440 801 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 CD79BP40259 229 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 HNF4AP41235 474 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 MNAT1P51948 309 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 EMP2P54851 167 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SLC20A2Q08357 652 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 PRKAA1Q13131 559 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 TRADDQ15628 312 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 TXNRD1Q16881 649 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SLC10A6Q3KNW5 377 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ALKBH6Q3KRA9 238 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ZSCAN23Q3MJ62 389 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 HEPHL1Q6MZM0 1159 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ZNF773Q6PK81 442 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SLC22A25Q6T423 547 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 MFSD7Q6UXD7 560 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 PACS1Q6VY07 963 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 Q6ZTK2 550 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 PIWIL3Q7Z3Z3 882 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 FBXO33Q7Z6M2 555 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ENTHD1Q8IYW4 607 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 OXR1Q8N573 874 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ANKRD52Q8NB46 1076 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 AGBL5Q8NDL9 886 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 OR2T11Q8NH01 316 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 RUFY2Q8WXA3 655 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 RAPGEF4Q8WZA2 1011 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 ZC3HAV1LQ96H79 300 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 SECISBP2Q96T21 854 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 GDF15Q99988 308 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 GJB4Q9NTQ9 266 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 SEPT11Q9NVA2 429 aaKnown RBP1.59□□□□□ -2.16
XRN1-214ENST00000498077 TFCP2L1Q9NZI6 479 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 RWDD2AQ9UIY3 292 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 GGA2Q9UJY4 613 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 GGA1Q9UJY5 639 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 PNMA2Q9UL42 364 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 TRAK1Q9UPV9 953 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 RAXQ9Y2V3 346 aa1.59□□□□□ -2.16
XRN1-214ENST00000498077 YJEFN3A6XGL0 299 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 FCN1O00602 326 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NFIBO00712 420 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 IPO8O15397 1037 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 WISP3O95389 354 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 RECKO95980 971 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 F9P00740 461 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 GPIP06744 558 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 HNRNPCP07910 306 aaKnown RBP eCLIP1.58□□□□□ -2.16
XRN1-214ENST00000498077 ATF4P18848 351 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 IMPDH1P20839 514 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CALB2P22676 271 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ARL2P36404 184 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CDKN2AP42771 156 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 EPHA5P54756 1037 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ADARP55265 1226 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 DYNLL1P63167 89 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CBFBQ13951 182 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 UBE4AQ14139 1066 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 PUM3Q15397 648 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 AANATQ16613 207 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SEZ6Q53EL9 994 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 TIGD7Q6NT04 549 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 CROCCP2Q86T23 111 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SLCO6A1Q86UG4 719 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 DDX42Q86XP3 938 aaKnown RBP eCLIP1.58□□□□□ -2.16
XRN1-214ENST00000498077 RBM12BQ8IXT5 1001 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 PNLDC1Q8NA58 520 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 KCNE4Q8WWG9 221 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 RPGRQ92834 1020 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 BRF1Q92994 677 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CALR3Q96L12 384 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 C7orf26Q96N11 449 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CDC6Q99741 560 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 CMKLR1Q99788 373 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 MED10Q9BTT4 135 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 METTL22Q9BUU2 404 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 STK33Q9BYT3 514 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 NSUN3Q9H649 340 aaKnown RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 NPVFQ9HCQ7 196 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 HMX1Q9NP08 348 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 TMPRSS4Q9NRS4 437 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZSCAN32Q9NX65 697 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZIM2Q9NZV7 527 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 C5P01031 1676 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 KNL1Q8NG31 2342 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 SBF2Q86WG5 1849 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 AKAP11Q9UKA4 1901 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 PRR23AA6NEV1 266 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 ADARB2-AS1A8MUL3 147 aa1.58□□□□□ -2.16
XRN1-214ENST00000498077 KDM4EB2RXH2 506 aaPredicted RBP1.58□□□□□ -2.16
XRN1-214ENST00000498077 NPIPB6E9PJ23 425 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms