RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 FRMD3A2A2Y4 597 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 K7ENM7 598 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
ERCC8-208ENST00000497892 GAP43P17677 238 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 IGFBP4P22692 258 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 PROZP22891 400 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 CMA1P23946 247 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 ABCD1P33897 745 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 MLH1P40692 756 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 KCNC4Q03721 635 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 STRN3Q13033 797 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 DCAF4L1Q3SXM0 396 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 ZNF568Q3ZCX4 644 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 SPOUT1Q5T280 376 aaKnown RBP12.34□□□□□ -0.43
ERCC8-208ENST00000497892 ZPBP2Q6X784 338 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 APBB1IPQ7Z5R6 666 aaPredicted RBP12.34□□□□□ -0.43
ERCC8-208ENST00000497892 SFR1Q86XK3 245 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 COLGALT1Q8NBJ5 622 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
ERCC8-208ENST00000497892 PYM1Q9BRP8 204 aaKnown RBP12.34□□□□□ -0.43
ERCC8-208ENST00000497892 TARS2Q9BW92 718 aaKnown RBP12.34□□□□□ -0.43
ERCC8-208ENST00000497892 LRRC27Q9C0I9 530 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 ZHX3Q9H4I2 956 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 PTPRHQ9HD43 1115 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 SEL1LQ9UBV2 794 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 KCNH3Q9ULD8 1083 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 INPP5FQ9Y2H2 1132 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 GIT1Q9Y2X7 761 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 PRUNE2Q8WUY3 3088 aa12.34□□□□□ -0.43
ERCC8-208ENST00000497892 FAM237AA0A1B0GTK4 181 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 ARL5CA6NH57 179 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 ABLIM1O14639 778 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 GRM6O15303 877 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 ITGB1P05556 798 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 PFKFB1P16118 471 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 AKAP5P24588 427 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 PPM1AP35813 382 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 AFF1P51825 1210 aaKnown RBP12.33□□□□□ -0.44
ERCC8-208ENST00000497892 PTPROQ16827 1216 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 CNNM4Q6P4Q7 775 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 KCNT2Q6UVM3 1135 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 KLHL23Q8NBE8 558 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 TTC13Q8NBP0 860 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 KCNV2Q8TDN2 545 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 MRPL38Q96DV4 380 aaKnown RBP12.33□□□□□ -0.44
ERCC8-208ENST00000497892 ZFP42Q96MM3 310 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 ZNF558Q96NG5 402 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 GAD1Q99259 594 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 APOL6Q9BWW8 343 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 TRIM9Q9C026 710 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 LMAN2LQ9H0V9 348 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 CDT1Q9H211 546 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 ST6GALNAC4Q9H4F1 302 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
ERCC8-208ENST00000497892 OLFML3Q9NRN5 406 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 TBX20Q9UMR3 447 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 PLAGL2Q9UPG8 496 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 HPSEQ9Y251 543 aa12.33□□□□□ -0.44
ERCC8-208ENST00000497892 CITO14578 2027 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 A0A1W2PQ64 194 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 A0A1W2PQD8 194 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 B4GALT3O60512 393 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 ZC3H11AO75152 810 aaKnown RBP eCLIP12.32□□□□□ -0.44
ERCC8-208ENST00000497892 TOM1L1O75674 476 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 FGF18O76093 207 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 RECQL4O94761 1208 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 PIGRP01833 764 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 MCF2P10911 925 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 NMT1P30419 496 aaKnown RBP12.32□□□□□ -0.44
ERCC8-208ENST00000497892 PBX3P40426 434 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 GTF2BQ00403 316 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 AMPD3Q01432 767 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 UBE3AQ05086 875 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 RNASELQ05823 741 aaKnown RBP12.32□□□□□ -0.44
ERCC8-208ENST00000497892 MPZL3Q6UWV2 235 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 MAP4K3Q8IVH8 894 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 SLC39A11Q8N1S5 342 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 GSTCDQ8NEC7 633 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 STAMQ92783 540 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 HVCN1Q96D96 273 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 ALG13Q9NP73 1137 aaKnown RBP12.32□□□□□ -0.44
ERCC8-208ENST00000497892 ANKFY1Q9P2R3 1169 aa12.32□□□□□ -0.44
ERCC8-208ENST00000497892 PDCD11Q14690 1871 aaKnown RBP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 MYO7AQ13402 2215 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 BRWD1Q9NSI6 2320 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 TRIP11Q15643 1979 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 A0A1B0GVL5 298 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 CARNS1A5YM72 827 aa12.31□□□□□ -0.44
ERCC8-208ENST00000497892 HNRNPDLO14979 420 aaKnown RBP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 ACTN4O43707 911 aaKnown RBP12.31□□□□□ -0.44
ERCC8-208ENST00000497892 POMCP01189 267 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms