RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	CYFIP2	Q96F07	1278 aa		7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	CEP95	Q96GE4	821 aa		7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	LOXL4	Q96JB6	756 aa		7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	TMX3	Q96JJ7	454 aa		7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	AIFM3	Q96NN9	605 aa		7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	NMRK2	Q9NPI5	230 aa		7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	CFAP20	Q9Y6A4	193 aa	Known RBP	7.4	□□□□□ -1.22
TRA2A-210	ENST00000497730	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	PATE3	B3GLJ2	98 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730		K7ESM1	405 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	WNT10B	O00744	389 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	AMY1A	P04745	511 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	GNAT2	P19087	354 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	FPR1	P21462	350 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	LPO	P22079	712 aa	Predicted RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	GUCY1A2	P33402	732 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	CDC42EP1	Q00587	391 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	HHEX	Q03014	270 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ICAM4	Q14773	271 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ELAVL1	Q15717	326 aa	Known RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	NXN	Q6DKJ4	435 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	MFSD5	Q6N075	450 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	EPM2AIP1	Q7L775	607 aa	Predicted RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ZNF572	Q7Z3I7	529 aa	Predicted RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	XYLT1	Q86Y38	959 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ELOA2	Q8IYF1	753 aa	Predicted RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	TCEAL8	Q8IYN2	117 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	PRR18	Q8N4B5	295 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ZGPAT	Q8N5A5	531 aa	Known RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	MAGEB6	Q8N7X4	407 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	HPS3	Q969F9	1004 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	MVB12A	Q96EY5	273 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ANLN	Q9NQW6	1124 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	RAPGEFL1	Q9UHV5	662 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	HDAC5	Q9UQL6	1122 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	RUVBL1	Q9Y265	456 aa	Known RBP	7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	PCDHB1	Q9Y5F3	818 aa		7.39	□□□□□ -1.23
TRA2A-210	ENST00000497730	ZNF623	O75123	536 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	RPLP2	P05387	115 aa	Known RBP	7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	RAP2A	P10114	183 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	IL2RB	P14784	551 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	ALOX15	P16050	662 aa	Predicted RBP	7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	DDC	P20711	480 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	COMT	P21964	271 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	PCSK1	P29120	753 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	TARDBP	Q13148	414 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	PGS1	Q32NB8	556 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	C14orf80	Q86SX3	495 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	SGMS1	Q86VZ5	419 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	MB21D1	Q8N884	522 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	CXorf38	Q8TB03	319 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730		Q8TCH9	128 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	CLPTM1L	Q96KA5	538 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	MPHOSPH9	Q99550	1183 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	CPPED1	Q9BRF8	314 aa	Predicted RBP	7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	SLC12A5	Q9H2X9	1139 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	MOCS1	Q9NZB8	636 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	ACTL7A	Q9Y615	435 aa		7.38	□□□□□ -1.23
TRA2A-210	ENST00000497730	SGTA	O43765	313 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	ATF3	P18847	181 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	ALDH1A3	P47895	512 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	FLT3LG	P49771	235 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	DSC2	Q02487	901 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	PTH1R	Q03431	593 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	SP140	Q13342	867 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	FAM47A	Q5JRC9	791 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	ATAT1	Q5SQI0	421 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	AFMID	Q63HM1	303 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	TTC7B	Q86TV6	843 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	CAMKK1	Q8N5S9	505 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	DNER	Q8NFT8	737 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	RELT	Q969Z4	430 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	BORCS6	Q96GS4	357 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	DEF6	Q9H4E7	631 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	ST6GALNAC2	Q9UJ37	374 aa		7.37	□□□□□ -1.23
TRA2A-210	ENST00000497730	ATRNL1	Q5VV63	1379 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	GOLGA6C	A6NDK9	693 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	GOLGA6B	A6NDN3	693 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	CAPN14	A8MX76	684 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730		B5MCH6	92 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	FOXD2	O60548	495 aa	Predicted RBP	7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	MFAP3L	O75121	409 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	IPO13	O94829	963 aa	Known RBP	7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	GOLGA6D	P0CG33	693 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	ACO1	P21399	889 aa	Known RBP	7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	MTM1	Q13496	603 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	MINDY4	Q4G0A6	757 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	HS1BP3	Q53T59	392 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	ANKS6	Q68DC2	871 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	GADL1	Q6ZQY3	521 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	ZNF808	Q8N4W9	903 aa	Predicted RBP	7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	CHST13	Q8NET6	341 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	SLC35B2	Q8TB61	432 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	SLC35G2	Q8TBE7	412 aa		7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	NSUN6	Q8TEA1	469 aa	Known RBP	7.36	□□□□□ -1.23
TRA2A-210	ENST00000497730	ST8SIA2	Q92186	375 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms