RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ABHD18Q0P651 414 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 ACAP2Q15057 778 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 FAM47AQ5JRC9 791 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 ZNF572Q7Z3I7 529 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-212ENST00000496458 ZFPM1Q8IX07 1006 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 OR10H5Q8NGA6 315 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 SLC35B2Q8TB61 432 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 ZNF483Q8TF39 744 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-212ENST00000496458 FAM193BQ96PV7 902 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-212ENST00000496458 NDC1Q9BTX1 674 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 SENP6Q9GZR1 1112 aaPredicted RBP7.67□□□□□ -1.18
SF3B1-212ENST00000496458 KCNH6Q9H252 994 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 LDAHQ9H6V9 325 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 MMRN2Q9H8L6 949 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 LANCL2Q9NS86 450 aa7.67□□□□□ -1.18
SF3B1-212ENST00000496458 CXorf49A8MYA2 514 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-212ENST00000496458 ALG1L2C9J202 215 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 WNT10BO00744 389 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 RECQL4O94761 1208 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 MCM7P33993 719 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 MGAT2Q10469 447 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 SEPT2Q15019 361 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 BMT2Q1RMZ1 405 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 EFCAB12Q6NXP0 572 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 ZNF276Q8N554 614 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 SLC25A43Q8WUT9 341 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-212ENST00000496458 FAXDC2Q96IV6 333 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 POGKQ9P215 609 aa7.66□□□□□ -1.18
SF3B1-212ENST00000496458 LEFTY2O00292 366 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 CYR61O00622 381 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 GABRDO14764 452 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 TRIM24O15164 1050 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 XPOTO43592 962 aaKnown RBP7.65□□□□□ -1.18
SF3B1-212ENST00000496458 ENDOD1O94919 500 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 PEX11BO96011 259 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 ALOX15P16050 662 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-212ENST00000496458 KLF10Q13118 480 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 SP140Q13342 867 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 SYT12Q8IV01 421 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.65□□□□□ -1.18
SF3B1-212ENST00000496458 OR2I1PQ8NGU4 316 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 STON2Q8WXE9 905 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 SSH1Q8WYL5 1049 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 JADE3Q92613 823 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 NRDE2Q9H7Z3 1164 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 SIK3Q9Y2K2 1263 aa7.65□□□□□ -1.18
SF3B1-212ENST00000496458 ATRNL1Q5VV63 1379 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 FAM171A2A8MVW0 826 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 RAP2AP10114 183 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 RBP3P10745 1247 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 CLRN1P58418 232 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 RAP2BP61225 183 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 NHLH2Q02577 135 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 AFMIDQ63HM1 303 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 DRICH1Q6PGQ1 229 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-212ENST00000496458 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.64□□□□□ -1.19
SF3B1-212ENST00000496458 ZFP28Q8NHY6 868 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 ZCRB1Q8TBF4 217 aaKnown RBP7.64□□□□□ -1.19
SF3B1-212ENST00000496458 NRG4Q8WWG1 115 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 DPF2Q92785 391 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 CLIP3Q96DZ5 547 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 GPRC5BQ9NZH0 403 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 TRPM5Q9NZQ8 1165 aa7.64□□□□□ -1.19
SF3B1-212ENST00000496458 ING1Q9UK53 422 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-212ENST00000496458 AJAP1Q9UKB5 411 aaPredicted RBP7.64□□□□□ -1.19
SF3B1-212ENST00000496458 SHTN1A0MZ66 631 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 ANKRD62A6NC57 917 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PJA2O43164 708 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCDHGA12O60330 932 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 NDUFS2O75306 463 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 SLPIP03973 132 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 ADH4P08319 380 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 SNRPA1P09661 255 aaKnown RBP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 IL2RBP14784 551 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 MAKP20794 623 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 MGAT1P26572 445 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 GUCY1A2P33402 732 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 ALDH1A3P47895 512 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 SLC6A9P48067 706 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCBP2Q15366 365 aaKnown RBP eCLIP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PTPROQ16827 1216 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 ATXN7L2Q5T6C5 722 aaPredicted RBP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 CCHCR1Q8TD31 782 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 FUBP3Q96I24 572 aaKnown RBP eCLIP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 SMAD5Q99717 465 aaKnown RBP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 ZNF768Q9H5H4 540 aaKnown RBP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 TMEM140Q9NV12 185 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 MOCS1Q9NZB8 636 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 TUBD1Q9UJT1 453 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 INTUQ9ULD6 942 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCDHGA9Q9Y5G4 932 aaKnown RBP7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCDHGA8Q9Y5G5 932 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCDHGA7Q9Y5G6 932 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCDHGA6Q9Y5G7 932 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 PCDHGA3Q9Y5H0 932 aa7.63□□□□□ -1.19
SF3B1-212ENST00000496458 WASHC2CQ9Y4E1 1318 aa7.62□□□□□ -1.19
SF3B1-212ENST00000496458 KLHL33A6NCF5 533 aa7.62□□□□□ -1.19
SF3B1-212ENST00000496458 AHRRA9YTQ3 701 aa7.62□□□□□ -1.19
SF3B1-212ENST00000496458 FZD9O00144 591 aa7.62□□□□□ -1.19
SF3B1-212ENST00000496458 FPR1P21462 350 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms