RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PDZD7Q9H5P4 517 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 CACNG4Q9UBN1 327 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 TTLL13PA6NNM8 815 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 N4BP3O15049 544 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 TGM5O43548 720 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 TADA2AO75478 443 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 OR52Z1P0C646 297 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 CREMQ03060 361 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 ORC2Q13416 577 aaPredicted RBP24.41■■□□□ 1.5
HDDC3-203ENST00000494993 TUSC3Q13454 348 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 HSP90AA2PQ14568 343 aaPredicted RBP24.41■■□□□ 1.5
HDDC3-203ENST00000494993 FLCNQ8NFG4 579 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 BSNDQ8WZ55 320 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 C8orf76Q96K31 380 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 PAAF1Q9BRP4 392 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 ZDHHC7Q9NXF8 308 aa24.41■■□□□ 1.5
HDDC3-203ENST00000494993 SF3B1O75533 1304 aaKnown RBP eCLIP24.4■■□□□ 1.5
HDDC3-203ENST00000494993 ARHGEF35A5YM69 484 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 RPL17P18621 184 aaKnown RBP24.4■■□□□ 1.5
HDDC3-203ENST00000494993 CYP11B2P19099 503 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 ZNF174Q15697 407 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 LILRA6Q6PI73 481 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 PADI6Q6TGC4 694 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 CCDC83Q8IWF9 413 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 NT5C3AQ9H0P0 336 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 EPS15L1Q9UBC2 864 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 FBXL21Q9UKT6 434 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 LIMCH1Q9UPQ0 1083 aa24.4■■□□□ 1.5
HDDC3-203ENST00000494993 PROB1E7EW31 1015 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 PTGESO14684 152 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 PRKCBP05771 671 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 NPR3P17342 541 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 NAMPTP43490 491 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 PRPF4BQ13523 1007 aaKnown RBP24.39■■□□□ 1.49
HDDC3-203ENST00000494993 MAPK6Q16659 721 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 TMEM132AQ24JP5 1023 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 RTP2Q5QGT7 225 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 MYADMQ96S97 322 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 CCDC113Q9H0I3 377 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 FOXP1Q9H334 677 aaPredicted RBP24.39■■□□□ 1.49
HDDC3-203ENST00000494993 PIDD1Q9HB75 910 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 SNTG2Q9NY99 539 aa24.39■■□□□ 1.49
HDDC3-203ENST00000494993 MYH15Q9Y2K3 1946 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 CASTOR2A6NHX0 329 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 NARSO43776 548 aaKnown RBP24.38■■□□□ 1.49
HDDC3-203ENST00000494993 RECQL4O94761 1208 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 SEC24BO95487 1268 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 AOC1P19801 751 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 PRSS55Q6UWB4 352 aaPredicted RBP24.38■■□□□ 1.49
HDDC3-203ENST00000494993 DEPTORQ8TB45 409 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 HASPINQ8TF76 798 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 RSAD2Q8WXG1 361 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 ADPGKQ9BRR6 497 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 LLPHQ9BRT6 129 aaKnown RBP24.38■■□□□ 1.49
HDDC3-203ENST00000494993 PRKD2Q9BZL6 878 aa24.38■■□□□ 1.49
HDDC3-203ENST00000494993 ACKR2O00590 384 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 KIF4AO95239 1232 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 EDN1P05305 212 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 THP07101 528 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 MUTP22033 750 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 PPP2R5AQ15172 486 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 TTC38Q5R3I4 469 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 HAUS3Q68CZ6 603 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 NOSTRINQ8IVI9 506 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 SIX5Q8N196 739 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 TTPALQ9BTX7 342 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 USP20Q9Y2K6 914 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 CITO14578 2027 aa24.37■■□□□ 1.49
HDDC3-203ENST00000494993 CFAP54Q96N23 3096 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 MYH11P35749 1972 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 DMDP11532 3685 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 FAM186AA6NE01 2351 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 ZMYND10O75800 440 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 LIG1P18858 919 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 NBL1P41271 181 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 NAB2Q15742 525 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 ERICH6BQ5W0A0 696 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 EEF1DP3Q658K8 133 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 FBXO18Q8NFZ0 1043 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 PIK3R5Q8WYR1 880 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 NXPE3Q969Y0 559 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 CXCL16Q9H2A7 254 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 FBXW11Q9UKB1 542 aa24.36■■□□□ 1.49
HDDC3-203ENST00000494993 PTPRZ1P23471 2315 aaPredicted RBP24.36■■□□□ 1.49
HDDC3-203ENST00000494993 RIF1Q5UIP0 2472 aaKnown RBP24.36■■□□□ 1.49
HDDC3-203ENST00000494993 PI15O43692 258 aa24.35■■□□□ 1.49
HDDC3-203ENST00000494993 FAM171A1Q5VUB5 890 aa24.35■■□□□ 1.49
HDDC3-203ENST00000494993 SLC44A3Q8N4M1 653 aa24.35■■□□□ 1.49
HDDC3-203ENST00000494993 RTP3Q9BQQ7 232 aa24.35■■□□□ 1.49
HDDC3-203ENST00000494993 CLSTN3Q9BQT9 956 aa24.35■■□□□ 1.49
HDDC3-203ENST00000494993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.35■■□□□ 1.49
HDDC3-203ENST00000494993 WNT16Q9UBV4 365 aa24.35■■□□□ 1.49
HDDC3-203ENST00000494993 CFHP08603 1231 aa24.34■■□□□ 1.49
HDDC3-203ENST00000494993 CCT6AP40227 531 aaKnown RBP24.34■■□□□ 1.49
HDDC3-203ENST00000494993 FXR2P51116 673 aaKnown RBP eCLIP24.34■■□□□ 1.49
HDDC3-203ENST00000494993 ELAVL2Q12926 359 aaKnown RBP24.34■■□□□ 1.49
HDDC3-203ENST00000494993 PSMD5Q16401 504 aa24.34■■□□□ 1.49
HDDC3-203ENST00000494993 ECM1Q16610 540 aa24.34■■□□□ 1.49
HDDC3-203ENST00000494993 DCAF4L1Q3SXM0 396 aa24.34■■□□□ 1.49
HDDC3-203ENST00000494993 GET4Q7L5D6 327 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms