RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LILRA6Q6PI73 481 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 PADI6Q6TGC4 694 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 SPATA31D4Q6ZUB0 917 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 ZNF707Q96C28 371 aaPredicted RBP25.68■■□□□ 1.7
COL27A1-208ENST00000494780 FOXP1Q9H334 677 aaPredicted RBP25.68■■□□□ 1.7
COL27A1-208ENST00000494780 PDZD7Q9H5P4 517 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 ZDHHC7Q9NXF8 308 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 SF3B1O75533 1304 aaKnown RBP eCLIP25.67■■□□□ 1.7
COL27A1-208ENST00000494780 MYBP10242 640 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 MUTP22033 750 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 NAMPTP43490 491 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 PRPF4BQ13523 1007 aaKnown RBP25.67■■□□□ 1.7
COL27A1-208ENST00000494780 MAPK6Q16659 721 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 BSNDQ8WZ55 320 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 RABGGTAQ92696 567 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 NT5C3AQ9H0P0 336 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 EPS15L1Q9UBC2 864 aa25.67■■□□□ 1.7
COL27A1-208ENST00000494780 DAXXQ9UER7 740 aaPredicted RBP25.67■■□□□ 1.7
COL27A1-208ENST00000494780 TTLL13PA6NNM8 815 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 ACKR2O00590 384 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 GFRA3O60609 400 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 PRKCBP05771 671 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 TMEM132AQ24JP5 1023 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 HAUS3Q68CZ6 603 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 CCDC83Q8IWF9 413 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 FLCNQ8NFG4 579 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 DEPTORQ8TB45 409 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 ADPGKQ9BRR6 497 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 CCDC113Q9H0I3 377 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 PIDD1Q9HB75 910 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 SNTG2Q9NY99 539 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 FBXL21Q9UKT6 434 aa25.66■■□□□ 1.7
COL27A1-208ENST00000494780 PROB1E7EW31 1015 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 THP07101 528 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 PPP2R5AQ15172 486 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 CWF19L1Q69YN2 538 aaKnown RBP25.65■■□□□ 1.7
COL27A1-208ENST00000494780 GLYCTKQ8IVS8 523 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 NXPE3Q969Y0 559 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 PAAF1Q9BRP4 392 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 PRKD2Q9BZL6 878 aa25.65■■□□□ 1.7
COL27A1-208ENST00000494780 MTCL1Q9Y4B5 1905 aaKnown RBP25.65■■□□□ 1.7
COL27A1-208ENST00000494780 PTGESO14684 152 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 RECQL4O94761 1208 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 SEC24BO95487 1268 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 NPR3P17342 541 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 RPL17P18621 184 aaKnown RBP25.64■■□□□ 1.7
COL27A1-208ENST00000494780 AOC1P19801 751 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 TRAPPC10P48553 1259 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 RBM25P49756 843 aaKnown RBP25.64■■□□□ 1.7
COL27A1-208ENST00000494780 RTP2Q5QGT7 225 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 TTC38Q5R3I4 469 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 FBXO18Q8NFZ0 1043 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 MYADMQ96S97 322 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 TTPALQ9BTX7 342 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.64■■□□□ 1.7
COL27A1-208ENST00000494780 CACNG4Q9UBN1 327 aa25.64■■□□□ 1.7
COL27A1-208ENST00000494780 CASTOR2A6NHX0 329 aa25.63■■□□□ 1.69
COL27A1-208ENST00000494780 ZMYND10O75800 440 aa25.63■■□□□ 1.69
COL27A1-208ENST00000494780 HMGN5P82970 282 aaKnown RBP25.63■■□□□ 1.69
COL27A1-208ENST00000494780 PRSS55Q6UWB4 352 aaPredicted RBP25.63■■□□□ 1.69
COL27A1-208ENST00000494780 NOSTRINQ8IVI9 506 aa25.63■■□□□ 1.69
COL27A1-208ENST00000494780 PIK3R5Q8WYR1 880 aa25.63■■□□□ 1.69
COL27A1-208ENST00000494780 KIF4AO95239 1232 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 LIG1P18858 919 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 CCT6AP40227 531 aaKnown RBP25.62■■□□□ 1.69
COL27A1-208ENST00000494780 FXR2P51116 673 aaKnown RBP eCLIP25.62■■□□□ 1.69
COL27A1-208ENST00000494780 EFNA5P52803 228 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 ELAVL2Q12926 359 aaKnown RBP25.62■■□□□ 1.69
COL27A1-208ENST00000494780 GNL2Q13823 731 aaKnown RBP25.62■■□□□ 1.69
COL27A1-208ENST00000494780 NAB2Q15742 525 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 DCAF4L1Q3SXM0 396 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 FAM171A1Q5VUB5 890 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 SIX5Q8N196 739 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 HASPINQ8TF76 798 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 RSAD2Q8WXG1 361 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 IFT74Q96LB3 600 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 ZSCAN31Q96LW9 406 aaPredicted RBP25.62■■□□□ 1.69
COL27A1-208ENST00000494780 RTP3Q9BQQ7 232 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 WNT16Q9UBV4 365 aa25.62■■□□□ 1.69
COL27A1-208ENST00000494780 ZFHX2Q9C0A1 2572 aaPredicted RBP25.61■■□□□ 1.69
COL27A1-208ENST00000494780 NARSO43776 548 aaKnown RBP25.61■■□□□ 1.69
COL27A1-208ENST00000494780 NBL1P41271 181 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 EEF1DP3Q658K8 133 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 PDXDC1Q6P996 788 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 CEP57Q86XR8 500 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 SLC44A3Q8N4M1 653 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 C4orf32Q8N8J7 132 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 LNX1Q8TBB1 728 aaPredicted RBP25.61■■□□□ 1.69
COL27A1-208ENST00000494780 KIFAP3Q92845 792 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 CLSTN3Q9BQT9 956 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 FBXW11Q9UKB1 542 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 NOL7Q9UMY1 257 aaKnown RBP25.61■■□□□ 1.69
COL27A1-208ENST00000494780 USP20Q9Y2K6 914 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 STK24Q9Y6E0 443 aa25.61■■□□□ 1.69
COL27A1-208ENST00000494780 PI15O43692 258 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 EDN1P05305 212 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 LAMP2P13473 410 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 PSMD5Q16401 504 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 ECM1Q16610 540 aa25.6■■□□□ 1.69
COL27A1-208ENST00000494780 FAM184AQ8NB25 1140 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms