RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 INTUQ9ULD6 942 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 PCNTO95613 3336 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 CLDN3O15551 220 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 PPFIA4O75335 1185 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 TOM1L1O75674 476 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 PALMO75781 387 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 PRKCBP05771 671 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 PRLRP16471 622 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 MAPK6Q16659 721 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 TDRD10Q5VZ19 366 aaKnown RBP17.86■□□□□ 0.45
ATG4B-225ENST00000494465 SAPCD2Q86UD0 394 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 ZBTB8OSQ8IWT0 167 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 TATDN2Q93075 761 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 NT5C1BQ96P26 610 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 C2orf40Q9H1Z8 148 aa17.86■□□□□ 0.45
ATG4B-225ENST00000494465 ZCCHC17Q9NP64 241 aaKnown RBP17.86■□□□□ 0.45
ATG4B-225ENST00000494465 GRID2IPA4D2P6 1211 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 MANSC4A6NHS7 340 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-225ENST00000494465 NCK2O43639 380 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 H2AFZP0C0S5 128 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 MFAP3P55082 362 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 SEZ6Q53EL9 994 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 H2AFVQ71UI9 128 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 MTERF4Q7Z6M4 381 aaKnown RBP17.85■□□□□ 0.45
ATG4B-225ENST00000494465 METTL13Q8N6R0 699 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 GPR161Q8N6U8 529 aaKnown RBP17.85■□□□□ 0.45
ATG4B-225ENST00000494465 ZNF668Q96K58 619 aaPredicted RBP17.85■□□□□ 0.45
ATG4B-225ENST00000494465 FNBP1Q96RU3 617 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 AGPAT1Q99943 283 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 PI4K2AQ9BTU6 479 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 FZD8Q9H461 694 aa17.85■□□□□ 0.45
ATG4B-225ENST00000494465 CTAGE15A4D2H0 777 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 PDE2AO00408 941 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-225ENST00000494465 CTAGE8P0CG41 777 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 MATR3P43243 847 aaKnown RBP eCLIP17.84■□□□□ 0.455e-10■■□□□ 12.9
ATG4B-225ENST00000494465 GALCP54803 685 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 NAP1L1P55209 391 aaKnown RBP17.84■□□□□ 0.45
ATG4B-225ENST00000494465 IGBP1P78318 339 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 CTAGE6Q86UF2 777 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 CTAGE4Q8IX94 777 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
ATG4B-225ENST00000494465 NLRP4Q96MN2 994 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 MINDY3Q9H8M7 445 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 TAS2R14Q9NYV8 317 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 MGAMO43451 1857 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 ZC3H11AO75152 810 aaKnown RBP eCLIP17.84■□□□□ 0.452e-8■□□□□ 9.8
ATG4B-225ENST00000494465 VNN1O95497 513 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 TNNI1P19237 187 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 PROZP22891 400 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 TNFSF9P41273 254 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 PTENP60484 403 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 MCL1Q07820 350 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 IQSEC1Q6DN90 963 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 NFRKBQ6P4R8 1299 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 CREG2Q8IUH2 290 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 EPS8L1Q8TE68 723 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 COG1Q8WTW3 980 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 CAPZA3Q96KX2 299 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 PTPRHQ9HD43 1115 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 NOCTQ9UK39 431 aaKnown RBP17.84■□□□□ 0.45
ATG4B-225ENST00000494465 ZHX1Q9UKY1 873 aaPredicted RBP17.84■□□□□ 0.45
ATG4B-225ENST00000494465 ANK1P16157 1881 aa17.84■□□□□ 0.45
ATG4B-225ENST00000494465 A0A0A6YYK5 440 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-225ENST00000494465 H3BRB1 525 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 ACKR2O00590 384 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 ASAP2O43150 1006 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 SGPL1O95470 568 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 MMP3P08254 477 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 IQCF3P0C7M6 154 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 TNFAIP3P21580 790 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 MBTD1Q05BQ5 628 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 TFDP1Q14186 410 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-225ENST00000494465 TAF1CQ15572 869 aaPredicted RBP17.83■□□□□ 0.45
ATG4B-225ENST00000494465 TSHZ1Q6ZSZ6 1077 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 NOA1Q8NC60 698 aaKnown RBP17.83■□□□□ 0.45
ATG4B-225ENST00000494465 OSBPL9Q96SU4 736 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 MAP7D2Q96T17 732 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 CGRRF1Q99675 332 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 NFKBIZQ9BYH8 718 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.45
ATG4B-225ENST00000494465 IFT122Q9HBG6 1241 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 FLRT1Q9NZU1 646 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 COL1A2P08123 1366 aa17.83■□□□□ 0.45
ATG4B-225ENST00000494465 KAT6AQ92794 2004 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 CYP26A1O43174 497 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 ECM2O94769 699 aaPredicted RBP17.83■□□□□ 0.44
ATG4B-225ENST00000494465 HLA-DRAP01903 254 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 HARSP12081 509 aaKnown RBP17.83■□□□□ 0.44
ATG4B-225ENST00000494465 CHRNB2P17787 502 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 GCNT1Q02742 428 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 MAP2K5Q13163 448 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 RGMBQ6NW40 437 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 ZBTB33Q86T24 672 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 NOP9Q86U38 636 aaKnown RBP17.83■□□□□ 0.44
ATG4B-225ENST00000494465 BRSK2Q8IWQ3 736 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 LRRC57Q8N9N7 239 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 ACP6Q9NPH0 428 aa17.83■□□□□ 0.44
ATG4B-225ENST00000494465 TMCO5BA8MYB1 307 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms