RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PARP2Q9UGN5 583 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 GIT1Q9Y2X7 761 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 IPPQ9Y573 584 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 C9IYK1 514 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 ANKRD63C9JTQ0 380 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 HOXD13P35453 343 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 ENPEPQ07075 957 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 EEF1DP3Q658K8 133 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 ANKRD40Q6AI12 368 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 TTI2Q6NXR4 508 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 SLC39A4Q6P5W5 647 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 ECHDC2Q86YB7 292 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 NT5DC4Q86YG4 428 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 FAM186BQ8IYM0 893 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 RNF169Q8NCN4 708 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 FAM213AQ9BRX8 229 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 FUCA2Q9BTY2 467 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 PCIF1Q9H4Z3 704 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 RSAD1Q9HA92 442 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
ACTB-213ENST00000493945 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
ACTB-213ENST00000493945 TTC3P53804 2025 aa16.23■□□□□ 0.19
ACTB-213ENST00000493945 TRIM49BA6NDI0 452 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 ENPP3O14638 875 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 EDN1P05305 212 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 ACRP10323 421 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 IBSPP21815 317 aaPredicted RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 ADSSP30520 456 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 MAGEA10P43363 369 aaPredicted RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 C11orf57Q6ZUT1 292 aaPredicted RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 ZNF365Q70YC5 407 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 CDR2LQ86X02 465 aaPredicted RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 BRSK2Q8IWQ3 736 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 PHOSPHO2Q8TCD6 241 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 HERVK_113Q902F9 699 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 SAAL1Q96ER3 474 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 ZBTB45Q96K62 511 aaPredicted RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 EIF2AQ9BY44 585 aaKnown RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 UBE2OQ9C0C9 1292 aaKnown RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 NXF3Q9H4D5 531 aaKnown RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 ASB7Q9H672 318 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 SLC38A7Q9NVC3 462 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 ARMCX3Q9UH62 379 aaPredicted RBP16.22■□□□□ 0.19
ACTB-213ENST00000493945 NFE2L3Q9Y4A8 694 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 SLC4A7Q9Y6M7 1214 aa16.22■□□□□ 0.19
ACTB-213ENST00000493945 ABLIM1O14639 778 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 MGEA5O60502 916 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 RECQL4O94761 1208 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 CDK11BP21127 795 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 AP3M2P53677 418 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 OSTNP61366 133 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 WDR5P61964 334 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 GPNMBQ14956 572 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 UBXN11Q5T124 520 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 OTOP2Q7RTS6 562 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 AOPEPQ8N6M6 819 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 CACTINQ8WUQ7 758 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 RNPC3Q96LT9 517 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 FBXL18Q96ME1 805 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 SRRTQ9BXP5 876 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 DMAC2Q9NW81 257 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 CPSF3Q9UKF6 684 aaKnown RBP16.21■□□□□ 0.19
ACTB-213ENST00000493945 DERAQ9Y315 318 aa16.21■□□□□ 0.19
ACTB-213ENST00000493945 TTLL13PA6NNM8 815 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 TISP43B9A030 160 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 TULP1O00294 542 aaPredicted RBP16.2■□□□□ 0.18
ACTB-213ENST00000493945 N4BP1O75113 896 aaKnown RBP16.2■□□□□ 0.18
ACTB-213ENST00000493945 EEF1GP26641 437 aaKnown RBP16.2■□□□□ 0.18
ACTB-213ENST00000493945 ACOT2P49753 483 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 FAM189BP81408 668 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 CETN1Q12798 172 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 TMEM240Q5SV17 173 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 FRMD5Q7Z6J6 570 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 ZC3H3Q8IXZ2 948 aaKnown RBP16.2■□□□□ 0.18
ACTB-213ENST00000493945 FAM193BQ96PV7 902 aaPredicted RBP16.2■□□□□ 0.18
ACTB-213ENST00000493945 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.2■□□□□ 0.187e-24■■□□□ 13
ACTB-213ENST00000493945 ZBED2Q9BTP6 218 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 USP20Q9Y2K6 914 aa16.2■□□□□ 0.18
ACTB-213ENST00000493945 TDRD15B5MCY1 1934 aaKnown RBP16.19■□□□□ 0.18
ACTB-213ENST00000493945 PDE4DIPQ5VU43 2346 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 GOLGA8IPA6NC78 632 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 GOLGA8JA6NMD2 632 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 TPM3P06753 285 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 TMEM191BP0C7N4 346 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 CXCL8P10145 99 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 MTIF2P46199 727 aaKnown RBP16.19■□□□□ 0.18
ACTB-213ENST00000493945 PMS1P54277 932 aaKnown RBP16.19■□□□□ 0.18
ACTB-213ENST00000493945 GRIK3Q13003 919 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 LRRC55Q6ZSA7 311 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 CREBRFQ8IUR6 639 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 LRRC43Q8N309 656 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 RDH13Q8NBN7 331 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 SMG8Q8ND04 991 aaKnown RBP16.19■□□□□ 0.18
ACTB-213ENST00000493945 TMC2Q8TDI7 906 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 LINC01599Q8WXQ3 324 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms