RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 PLPP4Q5VZY2 271 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 MPZL3Q6UWV2 235 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 ZPBP2Q6X784 338 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 DYMQ7RTS9 669 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 TAS1R3Q7RTX0 852 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 ZBTB33Q86T24 672 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 FAM178BQ8IXR5 827 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 VPS52Q8N1B4 723 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 EFHBQ8N7U6 833 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 PDILTQ8N807 584 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 MRPL43Q8N983 215 aaKnown RBP7.65□□□□□ -1.18
TOP3A-207ENST00000493648 IQUBQ8NA54 791 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 LRRC15Q8TF66 581 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 DDX12PQ92771 950 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 BICD1Q96G01 975 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 ACAP3Q96P50 834 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 CCDC94Q9BW85 323 aaPredicted RBP7.65□□□□□ -1.18
TOP3A-207ENST00000493648 CUEDC2Q9H467 287 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 PTPRHQ9HD43 1115 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 TOPORSQ9NS56 1045 aaPredicted RBP7.65□□□□□ -1.18
TOP3A-207ENST00000493648 FAM13BQ9NYF5 915 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 RCOR1Q9UKL0 485 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 TBX20Q9UMR3 447 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 FAM50BQ9Y247 325 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 SSX2IPQ9Y2D8 614 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 GDAQ9Y2T3 454 aa7.65□□□□□ -1.18
TOP3A-207ENST00000493648 COL6A3P12111 3177 aa7.65□□□□□ -1.19
TOP3A-207ENST00000493648 C2orf71A6NGG8 1288 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 MYMKA6NI61 221 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 CLDN3O15551 220 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 TADA2AO75478 443 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 RECQL4O94761 1208 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 BRD1O95696 1058 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 CTSAP10619 480 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 IDEP14735 1019 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 GAP43P17677 238 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PROZP22891 400 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 GTF2F1P35269 517 aaKnown RBP eCLIP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 NDUFV1P49821 464 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 LIG4P49917 911 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 KCNQ1P51787 676 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 OSTNP61366 133 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 KRT85P78386 507 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 GTF2BQ00403 316 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 TUSC3Q13454 348 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 KYAT1Q16773 422 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PTCRAQ6ISU1 281 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 ADGRD2Q7Z7M1 963 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 TMEM173Q86WV6 379 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 CCDC65Q8IXS2 484 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 GSTCDQ8NEC7 633 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 KCNN1Q92952 543 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PYM1Q9BRP8 204 aaKnown RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 COL25A1Q9BXS0 654 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 CDT1Q9H211 546 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 ST6GALNAC4Q9H4F1 302 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 MRPL44Q9H9J2 332 aaKnown RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PLSCR2Q9NRY7 297 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 SLC38A7Q9NVC3 462 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 ANKFY1Q9P2R3 1169 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 SEL1LQ9UBV2 794 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PCDHA7Q9UN72 937 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PRG3Q9Y2Y8 225 aaPredicted RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 PCDHGC5Q9Y5F6 944 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 IRAK3Q9Y616 596 aa7.64□□□□□ -1.19
TOP3A-207ENST00000493648 TCF20Q9UGU0 1960 aaKnown RBP7.64□□□□□ -1.19
TOP3A-207ENST00000493648 ATG2AQ2TAZ0 1938 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 A0A087X0B3 334 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 GRXCR2A6NFK2 248 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 HIDE1A8MVS5 230 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 H3BQ06 376 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 HNRNPDLO14979 420 aaKnown RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 LINC01565O15544 149 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 B4GALT3O60512 393 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 PIGRP01833 764 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 SOD2P04179 222 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 CLTAP09496 248 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 HARSP12081 509 aaKnown RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 NMT1P30419 496 aaKnown RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 LTBRP36941 435 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 NUCB2P80303 420 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 MCL1Q07820 350 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 HSP90AA2PQ14568 343 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 NOLC1Q14978 699 aaKnown RBP eCLIP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 HERC4Q5GLZ8 1057 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 AXDND1Q5T1B0 1012 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 SLFN12LQ6IEE8 588 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 KIAA1841Q6NSI8 718 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 SHC4Q6S5L8 630 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 ALKAL1Q6UXT8 129 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 TMEM184AQ6ZMB5 413 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 ZNF720Q7Z2F6 126 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 PPFIBP1Q86W92 1011 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 ADAMTS19Q8TE59 1207 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 BCL7CQ8WUZ0 217 aaPredicted RBP7.63□□□□□ -1.19
TOP3A-207ENST00000493648 DHX58Q96C10 678 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 HVCN1Q96D96 273 aa7.63□□□□□ -1.19
TOP3A-207ENST00000493648 DNAJC19Q96DA6 116 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms