RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 FAM207AQ9NSI2 230 aaPredicted RBP10.94□□□□□ -0.66
PRPF3-206ENST00000493553 EFCAB8A8MWE9 144 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 AKR1B10O60218 316 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 PRPF6O94906 941 aaKnown RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 TAL1P17542 331 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 ERVK-24P63145 666 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 NEDD9Q14511 834 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 EXOC3L4Q17RC7 722 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 WHAMMP3Q1A5X7 153 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 C11orf91Q3C1V1 193 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 XKR9Q5GH70 373 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 INTS8Q75QN2 995 aaKnown RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 RRAGAQ7L523 313 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 RAB44Q7Z6P3 723 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 UBXN4Q92575 508 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 KCNN1Q92952 543 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 RPGRIP1Q96KN7 1286 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 SYT17Q9BSW7 474 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 NHEJ1Q9H9Q4 299 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 DMAC2Q9NW81 257 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 ARGLU1Q9NWB6 273 aaPredicted RBP10.93□□□□□ -0.66
PRPF3-206ENST00000493553 AIPL1Q9NZN9 384 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 SLC9A2Q9UBY0 812 aa10.93□□□□□ -0.66
PRPF3-206ENST00000493553 ATP8B3O60423 1300 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 ANO9A1A5B4 782 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 K7ENM7 598 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 DDX39AO00148 427 aaKnown RBP10.92□□□□□ -0.66
PRPF3-206ENST00000493553 PMM2O15305 246 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 PRMT3O60678 531 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 IGHA1P01876 353 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 MYBP10242 640 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 EPHX2P34913 555 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 VAV2P52735 878 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 FKBP1BP68106 108 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 GTF2BQ00403 316 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 DMP1Q13316 513 aaPredicted RBP10.92□□□□□ -0.66
PRPF3-206ENST00000493553 IFI16Q16666 785 aaKnown RBP10.92□□□□□ -0.66
PRPF3-206ENST00000493553 CCDC122Q5T0U0 273 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 TMEM164Q5U3C3 297 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 FAM160B1Q5W0V3 765 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 IQCEQ6IPM2 695 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 WDR59Q6PJI9 974 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 RNF10Q8N5U6 811 aaKnown RBP10.92□□□□□ -0.66
PRPF3-206ENST00000493553 GLIS3Q8NEA6 775 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 SHCBP1Q8NEM2 672 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 TRIM58Q8NG06 486 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 FAM167AQ96KS9 214 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 IFT74Q96LB3 600 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 FAM81BQ96LP2 452 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 ALS2CR12Q96Q35 445 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 UIMC1Q96RL1 719 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 NTPCRQ9BSD7 190 aaKnown RBP10.92□□□□□ -0.66
PRPF3-206ENST00000493553 DESI2Q9BSY9 194 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 LSM14BQ9BX40 385 aaKnown RBP10.92□□□□□ -0.66
PRPF3-206ENST00000493553 STRA6Q9BX79 667 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 MROH8Q9H579 483 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 KIAA1586Q9HCI6 787 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 LZTFL1Q9NQ48 299 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 AGPAT3Q9NRZ7 376 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
PRPF3-206ENST00000493553 SSC5DA1L4H1 1573 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 ASTN1O14525 1302 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 RSPH10B2B2RC85 870 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 GAS2O43903 313 aaKnown RBP10.91□□□□□ -0.66
PRPF3-206ENST00000493553 EXOC3O60645 756 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 TACC1O75410 805 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 RSPH10BP0C881 870 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 KCNA2P16389 499 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 EPB42P16452 691 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 FERP16591 822 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 NCKAP1LP55160 1127 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 CCNA1P78396 465 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 CKAP4Q07065 602 aaKnown RBP10.91□□□□□ -0.66
PRPF3-206ENST00000493553 SNAPC2Q13487 334 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 MTF1Q14872 753 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 PTPN21Q16825 1174 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 ZNF569Q5MCW4 686 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 PRAMEF18Q5VWM3 479 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 GADL1Q6ZQY3 521 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 ANKRD7Q92527 254 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 COL26A1Q96A83 441 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 JAKMIP2Q96AA8 810 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 CDCA5Q96FF9 252 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 CHP1Q99653 195 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 JPH2Q9BR39 696 aaPredicted RBP10.91□□□□□ -0.66
PRPF3-206ENST00000493553 IFIH1Q9BYX4 1025 aaKnown RBP10.91□□□□□ -0.66
PRPF3-206ENST00000493553 SPATC1LQ9H0A9 340 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 PDCL3Q9H2J4 239 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 NRBP2Q9NSY0 501 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 AGPAT5Q9NUQ2 364 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 CDC23Q9UJX2 597 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 SCAF8Q9UPN6 1271 aaKnown RBP10.91□□□□□ -0.66
PRPF3-206ENST00000493553 SLC45A1Q9Y2W3 748 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 RIPK3Q9Y572 518 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
PRPF3-206ENST00000493553 RBBP6Q7Z6E9 1792 aaKnown RBP10.9□□□□□ -0.66
PRPF3-206ENST00000493553 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms