RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 EPC2Q52LR7 807 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 UBXN11Q5T124 520 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 ARMCX5Q6P1M9 558 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 FMR1NBQ8N0W7 255 aaPredicted RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 SMG8Q8ND04 991 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GOLGA5Q8TBA6 731 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 PPP2R3CQ969Q6 453 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 FAM212AQ96EL1 285 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 TMEM169Q96HH4 297 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 CASD1Q96PB1 797 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GAD1Q99259 594 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 CDT1Q9H211 546 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 PRDM12Q9H4Q4 367 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 RPF1Q9H9Y2 349 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 TYW1Q9NV66 732 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 SLC38A7Q9NVC3 462 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 KLK14Q9P0G3 267 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 CGNQ9P2M7 1197 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 STK39Q9UEW8 545 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 AGO2Q9UKV8 859 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 USP20Q9Y2K6 914 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 HES2Q9Y543 173 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 MRPL42Q9Y6G3 142 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 KIAA0391O15091 583 aaKnown RBP8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 OGTO15294 1046 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 GADD45BO75293 160 aaPredicted RBP8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 OFD1O75665 1012 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 RECQL4O94761 1208 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 PIGRP01833 764 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 ALDH2P05091 517 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 CLTAP09496 248 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 FOSL2P15408 326 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 PTMSP20962 102 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 GRM5P41594 1212 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 SCNN1GP51170 649 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 MCL1Q07820 350 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 KMT5BQ4FZB7 885 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 CLLU1OSQ5K130 101 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 EEF1DP3Q658K8 133 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 KCNT2Q6UVM3 1135 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 AGMOQ6ZNB7 445 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 Q7L0L9 218 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 TAS1R3Q7RTX0 852 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 CD302Q8IX05 232 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 NELFCDQ8IXH7 590 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 MICALL1Q8N3F8 863 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 COLGALT1Q8NBJ5 622 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 MICAL1Q8TDZ2 1067 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 CLP1Q92989 425 aaKnown RBP8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 ZBTB45Q96K62 511 aaPredicted RBP8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 GSDMAQ96QA5 445 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 C17orf80Q9BSJ5 609 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 TBC1D13Q9NVG8 400 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 SPG21Q9NZD8 308 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 FAN1Q9Y2M0 1017 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 COL4A6Q14031 1691 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
TM4SF1-204ENST00000493348 TTLL13PA6NNM8 815 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 CALUO43852 315 aaPredicted RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 ATF7P17544 494 aaPredicted RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 GARTP22102 1010 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 PPP1R2P41236 205 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 BCAR1P56945 870 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 SNRPFP62306 86 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 DPYDQ12882 1025 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 PNOCQ13519 176 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 SNW1Q13573 536 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 KCNB1Q14721 858 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 KNOP1Q1ED39 458 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 GDPD5Q8WTR4 605 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 KCNN1Q92952 543 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 P2RX5Q93086 422 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 HPS3Q969F9 1004 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 ZFP42Q96MM3 310 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 TSG101Q99816 390 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 TMEM175Q9BSA9 504 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 COLEC11Q9BWP8 271 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 LMAN2LQ9H0V9 348 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 TTYH1Q9H313 450 aaPredicted RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 PLEKHA5Q9HAU0 1116 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 RC3H2Q9HBD1 1191 aaKnown RBP8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 KIAA1586Q9HCI6 787 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 ENTPD7Q9NQZ7 604 aa8.86□□□□□ -0.99
TM4SF1-204ENST00000493348 PDCD11Q14690 1871 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 A0A0B4J269 797 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 MEIS3P2A8K0S8 358 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 H3BNC9 293 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 TADA2AO75478 443 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 FGF18O76093 207 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 RHOBTB3O94955 611 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CLSTN1O94985 981 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CSPG5O95196 566 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 IL18RAPO95256 599 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 MBD3O95983 291 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 EDN1P05305 212 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 PROZP22891 400 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CYP2J2P51589 502 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CASP5P51878 434 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 UBE3AQ05086 875 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms