RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 SLC16A4O15374 487 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 BMP15O95972 392 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 PLA2G4BP0C869 781 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 PDCP20941 246 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 SP100P23497 879 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-207ENST00000492954 GLUD2P49448 558 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 ITIH3Q06033 890 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 TUSC3Q13454 348 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 SF3A1Q15459 793 aaKnown RBP19.82■□□□□ 0.76
PTPRU-207ENST00000492954 FUT10Q6P4F1 479 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 KCTD17Q8N5Z5 321 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 B3GALT6Q96L58 329 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 AK8Q96MA6 479 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 ACO2Q99798 780 aaKnown RBP19.82■□□□□ 0.76
PTPRU-207ENST00000492954 C17orf75Q9HAS0 396 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 ADAM28Q9UKQ2 775 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 TNFSF13BQ9Y275 285 aa19.82■□□□□ 0.76
PTPRU-207ENST00000492954 TDRD15B5MCY1 1934 aaKnown RBP19.81■□□□□ 0.76
PTPRU-207ENST00000492954 NPHP3-ACAD11A0A0J9YXS1 232 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 THP07101 528 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 DSG1Q02413 1049 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 HSP90AA2PQ14568 343 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-207ENST00000492954 KIAA0319Q5VV43 1072 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 FEZF2Q8TBJ5 459 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 LRRC15Q8TF66 581 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 HASPINQ8TF76 798 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 FBXL18Q96ME1 805 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 MRPL4Q9BYD3 311 aaKnown RBP19.81■□□□□ 0.76
PTPRU-207ENST00000492954 CDT1Q9H211 546 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 POMKQ9H5K3 350 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 TSHZ2Q9NRE2 1034 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 SSX2IPQ9Y2D8 614 aa19.81■□□□□ 0.76
PTPRU-207ENST00000492954 RBM19Q9Y4C8 960 aaKnown RBP19.81■□□□□ 0.76
PTPRU-207ENST00000492954 TEX28O15482 410 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 TADA2AO75478 443 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 PLS3P13797 630 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 UBA7P41226 1012 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
PTPRU-207ENST00000492954 NAB2Q15742 525 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 ZNF568Q3ZCX4 644 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 KIAA1841Q6NSI8 718 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 APBB1IPQ7Z5R6 666 aaPredicted RBP19.8■□□□□ 0.76
PTPRU-207ENST00000492954 CEP120Q8N960 986 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 CALML4Q96GE6 196 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 RIPOR3Q96MK2 946 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 NECTIN4Q96NY8 510 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 TARS2Q9BW92 718 aaKnown RBP19.8■□□□□ 0.76
PTPRU-207ENST00000492954 PTPRHQ9HD43 1115 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 CHST7Q9NS84 486 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
PTPRU-207ENST00000492954 SPDYE4A6NLX3 237 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 PRR33A8MZF0 331 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 SLC26A4O43511 780 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 KIF4AO95239 1232 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 ADH1AP07327 375 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 SYT1P21579 422 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 LONP1P36776 959 aaKnown RBP19.79■□□□□ 0.76
PTPRU-207ENST00000492954 MTHFRP42898 656 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 RESTQ13127 1097 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 USP41Q3LFD5 358 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 ARSHQ5FYA8 562 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 GLRA4Q5JXX5 417 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 TMC5Q6UXY8 1006 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 ZBTB33Q86T24 672 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 SPIRE2Q8WWL2 714 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 NTPCRQ9BSD7 190 aaKnown RBP19.79■□□□□ 0.76
PTPRU-207ENST00000492954 SFXN1Q9H9B4 322 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 RXFP1Q9HBX9 757 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 KCND2Q9NZV8 630 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 CLIC4Q9Y696 253 aa19.79■□□□□ 0.76
PTPRU-207ENST00000492954 K7ELQ4 463 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-207ENST00000492954 GRM5P41594 1212 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 OSTNP61366 133 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 DHX8Q14562 1220 aaKnown RBP19.78■□□□□ 0.76
PTPRU-207ENST00000492954 KARSQ15046 597 aaKnown RBP19.78■□□□□ 0.76
PTPRU-207ENST00000492954 FAM173BQ6P4H8 233 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 GPBP1Q86WP2 473 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 TMEM161BQ8NDZ6 487 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 RIN2Q8WYP3 895 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-207ENST00000492954 INTS4Q96HW7 963 aaKnown RBP19.78■□□□□ 0.76
PTPRU-207ENST00000492954 CCDC94Q9BW85 323 aaPredicted RBP19.78■□□□□ 0.76
PTPRU-207ENST00000492954 MAN1C1Q9NR34 630 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 BLOC1S4Q9NUP1 217 aa19.78■□□□□ 0.76
PTPRU-207ENST00000492954 SF3B1O75533 1304 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTPRU-207ENST00000492954 ABLIM1O14639 778 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 GLUD1P00367 558 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 MYBP10242 640 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 PLCG1P19174 1290 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 PROZP22891 400 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 STRN3Q13033 797 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 PTPAQ15257 358 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 RTP2Q5QGT7 225 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 ATAT1Q5SQI0 421 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 MPZL3Q6UWV2 235 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 RASSF8Q8NHQ8 419 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 ZBTB45Q96K62 511 aaPredicted RBP19.77■□□□□ 0.76
PTPRU-207ENST00000492954 PPP1R10Q96QC0 940 aaKnown RBP19.77■□□□□ 0.76
PTPRU-207ENST00000492954 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.76
PTPRU-207ENST00000492954 NR2E1Q9Y466 385 aa19.77■□□□□ 0.76
PTPRU-207ENST00000492954 C2CD4DB7Z1M9 353 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms