RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MCL1Q07820 350 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 GRM1Q13255 1194 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 PRPF4BQ13523 1007 aaKnown RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 SURF1Q15526 300 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 NAB2Q15742 525 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 GRIK4Q16099 956 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 WHAMMP3Q1A5X7 153 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ZNF568Q3ZCX4 644 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ZACNQ401N2 412 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ZBTB41Q5SVQ8 909 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ATF7IP2Q5U623 682 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 MTHFD1LQ6UB35 978 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 MPZL3Q6UWV2 235 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 C15orf39Q6ZRI6 1047 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 TSHZ1Q6ZSZ6 1077 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ENOSF1Q7L5Y1 443 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 TLK2Q86UE8 772 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 IFNLR1Q8IU57 520 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 PPM1KQ8N3J5 372 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 RNF10Q8N5U6 811 aaKnown RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 LNX1Q8TBB1 728 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 TSC1Q92574 1164 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 ZBTB10Q96DT7 871 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 HHIPL1Q96JK4 782 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 NOX5Q96PH1 765 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 MAP7D2Q96T17 732 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 TCHPQ9BT92 498 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 INO80BQ9C086 356 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 FZD8Q9H461 694 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 PDE11AQ9HCR9 933 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 C1orf112Q9NSG2 853 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 FLRT1Q9NZU1 646 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 NAGPAQ9UK23 515 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 GNEQ9Y223 722 aaKnown RBP9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 AKT3Q9Y243 479 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 CAPN6Q9Y6Q1 641 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 DUSP10Q9Y6W6 482 aa9.88□□□□□ -0.83
SMARCC1-208ENST00000492896 CNTNAP2Q9UHC6 1331 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 RRN3P2A6NIE6 340 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 A6NJR5 290 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TTLL13PA6NNM8 815 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 FOXN3O00409 490 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 DDX3XO00571 662 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 ABLIM1O14639 778 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 DYNC1LI2O43237 492 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 CA12O43570 354 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TADA3O75528 432 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 F2P00734 622 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 HLA-DRAP01903 254 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 C4BPAP04003 597 aaKnown RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 ATP1A1P05023 1023 aaKnown RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 H2AFZP0C0S5 128 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TNFAIP3P21580 790 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 PROZP22891 400 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 CYP2C19P33261 490 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TM4SF4P48230 202 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 AP3M2P53677 418 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 WNT7BP56706 349 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 AMPD2Q01433 879 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 BIRC3Q13489 604 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 CCL14Q16627 93 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 FAM187BQ17R55 369 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 KIAA0753Q2KHM9 967 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 PRAMEF19Q5SWL8 479 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TDRD10Q5VZ19 366 aaKnown RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 LMBRD2Q68DH5 695 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 ALKBH5Q6P6C2 394 aaKnown RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 PAXIP1Q6ZW49 1069 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 H2AFVQ71UI9 128 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 TRAPPC11Q7Z392 1133 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 CEP112Q8N8E3 955 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 LRRN4CLQ8ND94 238 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 HELQQ8TDG4 1101 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 U2AF1L4Q8WU68 220 aaKnown RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 SHC3Q92529 594 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 KAT5Q92993 513 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 ZNF668Q96K58 619 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 KREMEN1Q96MU8 473 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 SYT11Q9BT88 431 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 AP5M1Q9H0R1 490 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.87□□□□□ -0.832e-6■■■■■ 96.1
SMARCC1-208ENST00000492896 INTUQ9ULD6 942 aa9.87□□□□□ -0.83
SMARCC1-208ENST00000492896 PTPRJQ12913 1337 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 A0A087WZ62 844 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 EFCAB8A8MWE9 144 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 KIF3CO14782 793 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 B4GALT5O43286 388 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 FAM189A1O60320 539 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 VTNP04004 478 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 USP8P40818 1118 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 TNFSF9P41273 254 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 CPT1AP50416 773 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 NAP1L1P55209 391 aaKnown RBP9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 FCGRTP55899 365 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 GCNT1Q02742 428 aa9.86□□□□□ -0.83
SMARCC1-208ENST00000492896 CKAP4Q07065 602 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms