RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 IGSF21Q96ID5 467 aa19.42■□□□□ 0.7
LMNB1-206ENST00000492190 VN1R3Q9BXE9 311 aa19.42■□□□□ 0.7
LMNB1-206ENST00000492190 TRIM9Q9C026 710 aa19.42■□□□□ 0.7
LMNB1-206ENST00000492190 NSUN3Q9H649 340 aaKnown RBP19.42■□□□□ 0.7
LMNB1-206ENST00000492190 VWA8A3KMH1 1905 aa19.42■□□□□ 0.7
LMNB1-206ENST00000492190 F8W810 466 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 FSCN2O14926 492 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 ACTN4O43707 911 aaKnown RBP19.41■□□□□ 0.7
LMNB1-206ENST00000492190 PIGRP01833 764 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 MCF2P10911 925 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 GAP43P17677 238 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 GTF2F1P35269 517 aaKnown RBP eCLIP19.41■□□□□ 0.7
LMNB1-206ENST00000492190 GRM5P41594 1212 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 CASP5P51878 434 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 OSTNP61366 133 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 NAB2Q15742 525 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 SEZ6Q53EL9 994 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 MAP4K3Q8IVH8 894 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 GRAMD1CQ8IYS0 662 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 TCHPQ9BT92 498 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 PANK4Q9NVE7 773 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 ANKFY1Q9P2R3 1169 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 CACNG4Q9UBN1 327 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 SEL1LQ9UBV2 794 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 SERTAD1Q9UHV2 236 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 LZTS1Q9Y250 596 aa19.41■□□□□ 0.7
LMNB1-206ENST00000492190 FAM237AA0A1B0GTK4 181 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 TISP43B9A030 160 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 ANKRD63C9JTQ0 380 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 NRP1O14786 923 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 HARSP12081 509 aaKnown RBP19.4■□□□□ 0.7
LMNB1-206ENST00000492190 MCL1Q07820 350 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 KCNA1Q09470 495 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 HYAL1Q12794 435 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 NOLC1Q14978 699 aaKnown RBP eCLIP19.4■□□□□ 0.7
LMNB1-206ENST00000492190 HERC4Q5GLZ8 1057 aaPredicted RBP19.4■□□□□ 0.7
LMNB1-206ENST00000492190 CNNM4Q6P4Q7 775 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 GLIS3Q8NEA6 775 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 HPS3Q969F9 1004 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 FAM193BQ96PV7 902 aaPredicted RBP19.4■□□□□ 0.7
LMNB1-206ENST00000492190 C7orf25Q9BPX7 421 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 TMEM175Q9BSA9 504 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 TLR9Q9NR96 1032 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 OLFML3Q9NRN5 406 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 MARCH5Q9NX47 278 aa19.4■□□□□ 0.7
LMNB1-206ENST00000492190 HNRNPDLO14979 420 aaKnown RBP19.39■□□□□ 0.69
LMNB1-206ENST00000492190 FAM189A1O60320 539 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 MYBP10242 640 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 SCP2P22307 547 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 GRIK3Q13003 919 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 COASYQ13057 564 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 COL19A1Q14993 1142 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 SKIV2LQ15477 1246 aaKnown RBP19.39■□□□□ 0.69
LMNB1-206ENST00000492190 TPRNQ4KMQ1 711 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 ALKAL1Q6UXT8 129 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.39■□□□□ 0.692e-6■□□□□ 9.4
LMNB1-206ENST00000492190 RABGGTAQ92696 567 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 BICD1Q96G01 975 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 TMEM169Q96HH4 297 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 RPS6KC1Q96S38 1066 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 PAAF1Q9BRP4 392 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 BLZF1Q9H2G9 400 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 MRPL44Q9H9J2 332 aaKnown RBP19.39■□□□□ 0.69
LMNB1-206ENST00000492190 MAGEF1Q9HAY2 307 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 FAN1Q9Y2M0 1017 aa19.39■□□□□ 0.69
LMNB1-206ENST00000492190 PRG3Q9Y2Y8 225 aaPredicted RBP19.39■□□□□ 0.69
LMNB1-206ENST00000492190 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-206ENST00000492190 A0A1W2PQ27 194 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 A0A1W2PQ64 194 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 A0A1W2PQD8 194 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 CLDN3O15551 220 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 EFEMP2O95967 443 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 ALDH2P05091 517 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 SLFN14P0C7P3 912 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 AFMP43652 599 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 OR1G1P47890 313 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 LIG4P49917 911 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 NDUFA8P51970 172 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 ASIC1P78348 528 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 TFF2Q03403 129 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 KRT17Q04695 432 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 CUL4BQ13620 913 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 XKR4Q5GH76 650 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 GLRA4Q5JXX5 417 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 ZBTB41Q5SVQ8 909 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 APBB1IPQ7Z5R6 666 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-206ENST00000492190 SLC17A8Q8NDX2 589 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 PPP1R10Q96QC0 940 aaKnown RBP19.38■□□□□ 0.69
LMNB1-206ENST00000492190 CCDC94Q9BW85 323 aaPredicted RBP19.38■□□□□ 0.69
LMNB1-206ENST00000492190 BDP1A6H8Y1 2624 aa19.38■□□□□ 0.69
LMNB1-206ENST00000492190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-206ENST00000492190 HIDE1A8MVS5 230 aa19.37■□□□□ 0.69
LMNB1-206ENST00000492190 IGFBP6P24592 240 aaPredicted RBP19.37■□□□□ 0.69
LMNB1-206ENST00000492190 TNFSF9P41273 254 aa19.37■□□□□ 0.69
LMNB1-206ENST00000492190 AMPD3Q01432 767 aa19.37■□□□□ 0.69
LMNB1-206ENST00000492190 EHHADHQ08426 723 aa19.37■□□□□ 0.69
LMNB1-206ENST00000492190 PLPP4Q5VZY2 271 aa19.37■□□□□ 0.69
LMNB1-206ENST00000492190 DDX53Q86TM3 631 aaKnown RBP19.37■□□□□ 0.69
LMNB1-206ENST00000492190 CCDC65Q8IXS2 484 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms