RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ITFG1Q8TB96 612 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 FAM20AQ96MK3 541 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 COLEC11Q9BWP8 271 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.73□□□□□ -0.05
USF1-206ENST00000491629 KLK14Q9P0G3 267 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 GIT1Q9Y2X7 761 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 PPME1Q9Y570 386 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 CHD6Q8TD26 2715 aa14.73□□□□□ -0.05
USF1-206ENST00000491629 PDCD11Q14690 1871 aaKnown RBP14.72□□□□□ -0.05
USF1-206ENST00000491629 KANSL1LA0AUZ9 987 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 DEXIO95424 95 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 CD72P21854 359 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 CYP4A11Q02928 519 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 NAB2Q15742 525 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 XKR9Q5GH70 373 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 PPP4R3AQ6IN85 833 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 ELMSAN1Q6PJG2 1045 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 EXOC8Q8IYI6 725 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 OXER1Q8TDS5 423 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 TCP11Q8WWU5 503 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 FGF13Q92913 245 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 CCDC51Q96ER9 411 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 CNTNAP3BQ96NU0 1288 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 MTRQ99707 1265 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 HINFPQ9BQA5 517 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 CNTNAP3Q9BZ76 1288 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 SLKQ9H2G2 1235 aaPredicted RBP14.72□□□□□ -0.05
USF1-206ENST00000491629 GJB4Q9NTQ9 266 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 CDH7Q9ULB5 785 aa14.72□□□□□ -0.05
USF1-206ENST00000491629 FAM205CA6NFA0 338 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 TTLL13PA6NNM8 815 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 INO80B-WBP1J3KQ70 363 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 SLITRK3O94933 977 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 NPTXRO95502 500 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 TGM1P22735 817 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 GLRA2P23416 452 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 ARL2P36404 184 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 POU5F1BQ06416 359 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 GRIK3Q13003 919 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 PCBP1Q15365 356 aaKnown RBP eCLIP14.71□□□□□ -0.05
USF1-206ENST00000491629 ZNF528Q3MIS6 628 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 SLC44A4Q53GD3 710 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 KRT25Q7Z3Z0 450 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 LNX1Q8TBB1 728 aaPredicted RBP14.71□□□□□ -0.05
USF1-206ENST00000491629 HASPINQ8TF76 798 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 NELL1Q92832 810 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 PHF20Q9BVI0 1012 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 HCFC1R1Q9NWW0 138 aa14.71□□□□□ -0.05
USF1-206ENST00000491629 ZFP37Q9Y6Q3 630 aaPredicted RBP14.71□□□□□ -0.05
USF1-206ENST00000491629 CNOT1A5YKK6 2376 aaKnown RBP14.71□□□□□ -0.05
USF1-206ENST00000491629 A0A087WWV3 80 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 A0A1B0GUA9 196 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 PTGESO14684 152 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 CCL16O15467 120 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 DKC1O60832 514 aaKnown RBP eCLIP14.7□□□□□ -0.06
USF1-206ENST00000491629 KIF4AO95239 1232 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 FZD5Q13467 585 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 HSP90AA2PQ14568 343 aaPredicted RBP14.7□□□□□ -0.06
USF1-206ENST00000491629 MXD4Q14582 209 aaPredicted RBP14.7□□□□□ -0.06
USF1-206ENST00000491629 MLF2Q15773 248 aaPredicted RBP14.7□□□□□ -0.06
USF1-206ENST00000491629 VARS2Q5ST30 1063 aaKnown RBP14.7□□□□□ -0.06
USF1-206ENST00000491629 NCAPH2Q6IBW4 605 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 NEK8Q86SG6 692 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 TRIM22Q8IYM9 498 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 ZBTB44Q8NCP5 570 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 KXD1Q9BQD3 176 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 ZSWIM4Q9H7M6 989 aa14.7□□□□□ -0.06
USF1-206ENST00000491629 TBX3O15119 743 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 CCNT1O60563 726 aaKnown RBP14.69□□□□□ -0.06
USF1-206ENST00000491629 KINO60870 393 aaKnown RBP14.69□□□□□ -0.06
USF1-206ENST00000491629 LILRB5O75023 590 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 NR1I2O75469 434 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 TADA2AO75478 443 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 C8AP07357 584 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 CSTF1Q05048 431 aaKnown RBP14.69□□□□□ -0.06
USF1-206ENST00000491629 GALNT17Q6IS24 598 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 SLC27A1Q6PCB7 646 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 RSPO2Q6UXX9 243 aaPredicted RBP14.69□□□□□ -0.06
USF1-206ENST00000491629 RUFY3Q7L099 469 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 OTUD6AQ7L8S5 288 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 TPH2Q8IWU9 490 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 PIK3R5Q8WYR1 880 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 SHDQ96IW2 340 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 HSD17B14Q9BPX1 270 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 TTPALQ9BTX7 342 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 NFKBIZQ9BYH8 718 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 OSBPL6Q9BZF3 934 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 PLA2G2FQ9BZM2 168 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 ZSWIM6Q9HCJ5 1215 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 LTB4R2Q9NPC1 389 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 SPATA6Q9NWH7 488 aaPredicted RBP14.69□□□□□ -0.06
USF1-206ENST00000491629 DNMT3BQ9UBC3 853 aaKnown RBP14.69□□□□□ -0.06
USF1-206ENST00000491629 FBXO4Q9UKT5 387 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 ZMYM2Q9UBW7 1377 aa14.69□□□□□ -0.06
USF1-206ENST00000491629 CITO14578 2027 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 CASTOR2A6NHX0 329 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 FAM170BA6NMN3 283 aa14.68□□□□□ -0.06
USF1-206ENST00000491629 NRG2O14511 850 aaPredicted RBP14.68□□□□□ -0.06
USF1-206ENST00000491629 EDN1P05305 212 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms