RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 SPATA31D3P0C874 917 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 RFC5P40937 340 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 FGD1P98174 961 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 EXOSC10Q01780 885 aaKnown RBP12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 DSC1Q08554 894 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 KRT32Q14532 448 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 Q4G0T1 1027 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 FUT10Q6P4F1 479 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 NOTUMQ6P988 496 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 SPATA31D4Q6ZUB0 917 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 NELL1Q92832 810 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 FGF14Q92915 247 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 PHF20Q9BVI0 1012 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 NAP1L2Q9ULW6 460 aaPredicted RBP12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 GIT1Q9Y2X7 761 aa12.44□□□□□ -0.42
CLCNKA-206ENST00000491433 ZMYM2Q9UBW7 1377 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 ARL5CA6NH57 179 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 LRRN2O75325 713 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 POU2F2P09086 479 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 SRGAP2CP0DJJ0 459 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 MYBP10242 640 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 CDC27P30260 824 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 HOXA11P31270 313 aaPredicted RBP12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 PPM1LQ5SGD2 360 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 UBXN11Q5T124 520 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 PARM1Q6UWI2 310 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 KSR1Q8IVT5 923 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 GLIS3Q8NEA6 775 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 CLDN23Q96B33 292 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 GAD1Q99259 594 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 TRIM6Q9C030 488 aaPredicted RBP12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 ANO2Q9NQ90 1003 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 FAM217BQ9NTX9 383 aaPredicted RBP12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 ADAM28Q9UKQ2 775 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 IPPQ9Y573 584 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 DMXL2Q8TDJ6 3036 aa12.43□□□□□ -0.42
CLCNKA-206ENST00000491433 SF3B1O75533 1304 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 TADA2AO75478 443 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 STBD1O95210 358 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 MLH1P40692 756 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 AFF1P51825 1210 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 LIMK1P53667 647 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 C19orf57Q0VDD7 668 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 UVSSAQ2YD98 709 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 ZNF852Q6ZMS4 543 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 ANO5Q75V66 913 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 OTUD6AQ7L8S5 288 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 GLYCTKQ8IVS8 523 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 CELF5Q8N6W0 485 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 SMG8Q8ND04 991 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 GATA6Q92908 595 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 FGF13Q92913 245 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 CEP170P1Q96L14 293 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 ESYT1Q9BSJ8 1104 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 DHX33Q9H6R0 707 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 SH3GLB2Q9NR46 395 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 CACNA2D2Q9NY47 1150 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 FBXW11Q9UKB1 542 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 KCNH3Q9ULD8 1083 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 HECTD1Q9ULT8 2610 aa12.42□□□□□ -0.42
CLCNKA-206ENST00000491433 CYP3A7-CYP3A51PA0A087WV96 503 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 TMEM150BA6NC51 233 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 KCNK5O95279 499 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 CYP3A7P24462 503 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 ADD1P35611 737 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 QARSP47897 775 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 SCNN1GP51170 649 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 ADCY1Q08828 1119 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 ELAVL2Q12926 359 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 FOXC1Q12948 553 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 GRIK3Q13003 919 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 MXD4Q14582 209 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 MOXD1Q6UVY6 613 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 B3GNT9Q6UX72 402 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 MAMSTRQ6ZN01 415 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 TBCKQ8TEA7 893 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 SH2D3AQ9BRG2 576 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 RPP25Q9BUL9 199 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 RNF26Q9BY78 433 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 CSRNP2Q9H175 543 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 PRMT8Q9NR22 394 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 RXFP3Q9NSD7 469 aa12.41□□□□□ -0.42
CLCNKA-206ENST00000491433 MAN2B1O00754 1011 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 TM4SF5O14894 197 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 ECI2O75521 394 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 P4HBP07237 508 aaKnown RBP12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 C8AP07357 584 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 POU5F1BQ06416 359 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 TFDP1Q14186 410 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 LPAL2Q16609 132 aa12.4□□□□□ -0.42
CLCNKA-206ENST00000491433 TPRG1Q6ZUI0 275 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms