RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SH3GLB2	Q9NR46	395 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	VPS54	Q9P1Q0	977 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	KCNH3	Q9ULD8	1083 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	SF3B1	O75533	1304 aa	Known RBP eCLIP	21.45	■■□□□ 1.02	9e-6	■■■■■ 68.9
CDK5RAP2-218	ENST00000491334	DOCK6	Q96HP0	2047 aa		21.45	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	SLC30A4	O14863	429 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	TSPAN1	O60635	241 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	TDP2	O95551	362 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	P4HB	P07237	508 aa	Known RBP	21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	UVSSA	Q2YD98	709 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	OTUD6A	Q7L8S5	288 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ETNPPL	Q8TBG4	499 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	CPB2	Q96IY4	423 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	CLSTN3	Q9BQT9	956 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	TTPAL	Q9BTX7	342 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	RNF26	Q9BY78	433 aa	Predicted RBP	21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	SLK	Q9H2G2	1235 aa	Predicted RBP	21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MYH15	Q9Y2K3	1946 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	USP24	Q9UPU5	2620 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ZFHX4	Q86UP3	3567 aa		21.44	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PTEN	P60484	403 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	SPEM2	Q0P670	501 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	GRIK3	Q13003	919 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MTAP	Q13126	283 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	HSP90AA2P	Q14568	343 aa	Predicted RBP	21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MXD4	Q14582	209 aa	Predicted RBP	21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	RTP2	Q5QGT7	225 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	LAIR1	Q6GTX8	287 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MOXD1	Q6UVY6	613 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MAMSTR	Q6ZN01	415 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	CEP57	Q86XR8	500 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	GSTCD	Q8NEC7	633 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PIK3R5	Q8WYR1	880 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	RABGGTA	Q92696	567 aa		21.43	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	INO80B-WBP1	J3KQ70	363 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	EML1	O00423	815 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	LRP3	O75074	770 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ECI2	O75521	394 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	RET	P07949	1114 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	POU2F2	P09086	479 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	AKAP5	P24588	427 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	POU5F1B	Q06416	359 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	FZD5	Q13467	585 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PABPC1L	Q4VXU2	614 aa	Known RBP	21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PDXDC1	Q6P996	788 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	RTL10	Q7L3V2	364 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	RASEF	Q8IZ41	740 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	LNX1	Q8TBB1	728 aa	Predicted RBP	21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	SLC26A6	Q9BXS9	759 aa		21.42	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PATJ	Q8NI35	1801 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MAN2B1	O00754	1011 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PPP2R5C	Q13362	524 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	TFDP1	Q14186	410 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	EMC2	Q15006	297 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PSMD5	Q16401	504 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	AXDND1	Q5T1B0	1012 aa	Predicted RBP	21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	FAM171A1	Q5VUB5	890 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	NPAS3	Q8IXF0	933 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	NXF3	Q9H4D5	531 aa	Known RBP	21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	HEBP1	Q9NRV9	189 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	BMP2K	Q9NSY1	1161 aa	Predicted RBP	21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	GDE1	Q9NZC3	331 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PARP2	Q9UGN5	583 aa		21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	DDX25	Q9UHL0	483 aa	Known RBP	21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MRPS23	Q9Y3D9	190 aa	Known RBP	21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	21.41	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	YWHAB	P31946	246 aa	Known RBP	21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	NTRK3	Q16288	839 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	LPAL2	Q16609	132 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	XKR9	Q5GH70	373 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334		Q6ZUG5	572 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	C4orf19	Q8IY42	314 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	SLC7A14	Q8TBB6	771 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	DDX1	Q92499	740 aa	Known RBP	21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	BRF1	Q92994	677 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	FAM20A	Q96MK3	541 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	MTR	Q99707	1265 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	IER2	Q9BTL4	223 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	KLK14	Q9P0G3	267 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	DNMT3B	Q9UBC3	853 aa	Known RBP	21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	PCDHA4	Q9UN74	947 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	F5	P12259	2224 aa		21.4	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	ZMYM2	Q9UBW7	1377 aa		21.39	■■□□□ 1.02
CDK5RAP2-218	ENST00000491334	IFNAR1	P17181	557 aa		21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	ARF4	P18085	180 aa	Predicted RBP	21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	ELAVL2	Q12926	359 aa	Known RBP	21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	TUSC3	Q13454	348 aa		21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	IFNLR1	Q8IU57	520 aa	Predicted RBP	21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	DNASE1L2	Q92874	299 aa		21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	MCRS1	Q96EZ8	462 aa		21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	HCFC1R1	Q9NWW0	138 aa		21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	TDRD15	B5MCY1	1934 aa	Known RBP	21.39	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	CNOT1	A5YKK6	2376 aa	Known RBP	21.38	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	COL4A3	Q01955	1670 aa		21.38	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	FOXD2	O60548	495 aa	Predicted RBP	21.38	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	RAB33A	Q14088	237 aa		21.38	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	SLC27A1	Q6PCB7	646 aa		21.38	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	PRR23B	Q6ZRT6	265 aa		21.38	■■□□□ 1.01
CDK5RAP2-218	ENST00000491334	HASPIN	Q8TF76	798 aa		21.38	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms