RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TARS2Q9BW92 718 aaKnown RBP16.71■□□□□ 0.27
COL27A1-206ENST00000490831 CDT1Q9H211 546 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 STK17AQ9UEE5 414 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-206ENST00000490831 H0YCG3 227 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 NR1I2O75469 434 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 SOD2P04179 222 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 SRGAP2BP0DMP2 458 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 GRM5P41594 1212 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 CEBPZQ03701 1054 aaKnown RBP16.7■□□□□ 0.26
COL27A1-206ENST00000490831 TUSC3Q13454 348 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 CLUL1Q15846 466 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 XKR4Q5GH76 650 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 SPECC1Q5M775 1068 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 ZPBP2Q6X784 338 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 GPR65Q8IYL9 337 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 RASSF8Q8NHQ8 419 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 HERC2P3Q9BVR0 1158 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 COLEC11Q9BWP8 271 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 CD320Q9NPF0 282 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 PRG3Q9Y2Y8 225 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-206ENST00000490831 HCFC2Q9Y5Z7 792 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 MYH15Q9Y2K3 1946 aa16.7■□□□□ 0.26
COL27A1-206ENST00000490831 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 THP07101 528 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 MCF2P10911 925 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 HOXB8P17481 243 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-206ENST00000490831 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-206ENST00000490831 ZP2Q05996 745 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 STRN3Q13033 797 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 ZNF568Q3ZCX4 644 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 ANKRD54Q6NXT1 300 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 MPZL3Q6UWV2 235 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 ALKAL1Q6UXT8 129 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 ADHFE1Q8IWW8 467 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 AUTS2Q8WXX7 1259 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 SUSD6Q92537 303 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 CASP10Q92851 521 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 ZNF396Q96N95 335 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-206ENST00000490831 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 S1PR5Q9H228 398 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 PARVGQ9HBI0 331 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 C5orf42Q9H799 3197 aa16.69■□□□□ 0.26
COL27A1-206ENST00000490831 F8W810 466 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 PPP6R2O75170 966 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 TOM1L1O75674 476 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 YEATS4O95619 227 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
COL27A1-206ENST00000490831 ZSCAN22P10073 491 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-206ENST00000490831 TXLNAP40222 546 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 DHX8Q14562 1220 aaKnown RBP16.68■□□□□ 0.26
COL27A1-206ENST00000490831 SYCE2Q6PIF2 218 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 GJD3Q8N144 294 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 CEP120Q8N960 986 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 SLC22A17Q8WUG5 538 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 PPP1R10Q96QC0 940 aaKnown RBP16.68■□□□□ 0.26
COL27A1-206ENST00000490831 MRPL17Q9NRX2 175 aaKnown RBP16.68■□□□□ 0.26
COL27A1-206ENST00000490831 CHST7Q9NS84 486 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 ADAM28Q9UKQ2 775 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 SSX2IPQ9Y2D8 614 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 GDAQ9Y2T3 454 aa16.68■□□□□ 0.26
COL27A1-206ENST00000490831 USP15Q9Y4E8 981 aaPredicted RBP16.68■□□□□ 0.26
COL27A1-206ENST00000490831 SPTLC2O15270 562 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 FAM13AO94988 1023 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 F13A1P00488 732 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 PIGRP01833 764 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 ABCD1P33897 745 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 DSG1Q02413 1049 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 MCL1Q07820 350 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 HSP90AA2PQ14568 343 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-206ENST00000490831 STK38Q15208 465 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 KIAA0319Q5VV43 1072 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 RRAGBQ5VZM2 374 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 FUT10Q6P4F1 479 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 TAS1R1Q7RTX1 841 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 PPFIBP1Q86W92 1011 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 MYCT1Q8N699 235 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 KLHL5Q96PQ7 755 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 PAAF1Q9BRP4 392 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 CCDC94Q9BW85 323 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-206ENST00000490831 EMILIN2Q9BXX0 1053 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 ST6GALNAC4Q9H4F1 302 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 RXFP1Q9HBX9 757 aa16.67■□□□□ 0.26
COL27A1-206ENST00000490831 TOPORSQ9NS56 1045 aaPredicted RBP16.67■□□□□ 0.26
COL27A1-206ENST00000490831 A0A087X0B3 334 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 TMEM189-UBE2V1I3L0A0 370 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 TRAK2O60296 914 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 C1RP00736 705 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 URODP06132 367 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 CNPP09543 421 aaKnown RBP16.66■□□□□ 0.26
COL27A1-206ENST00000490831 GLUD2P49448 558 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 YARSP54577 528 aaKnown RBP16.66■□□□□ 0.26
COL27A1-206ENST00000490831 GTF2BQ00403 316 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 NOLC1Q14978 699 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL27A1-206ENST00000490831 TPRNQ4KMQ1 711 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 ATL3Q6DD88 541 aa16.66■□□□□ 0.26
COL27A1-206ENST00000490831 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms