RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 LIMA1Q9UHB6 759 aaKnown RBP14.41□□□□□ -0.1
SNX12-205ENST00000490561 CPSF3Q9UKF6 684 aaKnown RBP14.41□□□□□ -0.1
SNX12-205ENST00000490561 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.41□□□□□ -0.1
SNX12-205ENST00000490561 UMODL1Q5DID0 1318 aa14.41□□□□□ -0.1
SNX12-205ENST00000490561 LRRC10BA6NIK2 292 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 CBFA2T2O43439 604 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 FAM189A1O60320 539 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 ZNF623O75123 536 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 STAG3L1P0CL83 205 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 CASP4P49662 377 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 MRE11P49959 708 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 AP3M2P53677 418 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 CYP24A1Q07973 514 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 BFSP1Q12934 665 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 PPIGQ13427 754 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNX12-205ENST00000490561 PSMD6Q15008 389 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 MAN2A1Q16706 1144 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 UBXN11Q5T124 520 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 NT5DC4Q86YG4 428 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 IRF2BP1Q8IU81 584 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 CBWD2Q8IUF1 395 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 TRIM59Q8IWR1 403 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 THNSL1Q8IYQ7 743 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 C7orf61Q8IZ16 206 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 RSPH1Q8WYR4 309 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 SCLYQ96I15 445 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 FNBP1Q96RU3 617 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 ADAM2Q99965 735 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 HSD3B7Q9H2F3 369 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 TMX1Q9H3N1 280 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 PLEKHA5Q9HAU0 1116 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 FAM105AQ9NUU6 356 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
SNX12-205ENST00000490561 PCDHB2Q9Y5E7 798 aa14.4□□□□□ -0.1
SNX12-205ENST00000490561 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 GOLGA8IPA6NC78 632 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 GOLGA8JA6NMD2 632 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 N4BP1O75113 896 aaKnown RBP14.39□□□□□ -0.11
SNX12-205ENST00000490561 EOMESO95936 686 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 SERPINC1P01008 464 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 ACTN1P12814 892 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 GTF2H1P32780 548 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 ACOT2P49753 483 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 VAMP7P51809 220 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 IKBKEQ14164 716 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 SARM1Q6SZW1 724 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 CRELD2Q6UXH1 353 aaPredicted RBP14.39□□□□□ -0.11
SNX12-205ENST00000490561 SLC24A5Q71RS6 500 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 MRPL10Q7Z7H8 261 aaKnown RBP14.39□□□□□ -0.11
SNX12-205ENST00000490561 CDR2LQ86X02 465 aaPredicted RBP14.39□□□□□ -0.11
SNX12-205ENST00000490561 CREBRFQ8IUR6 639 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 RDH13Q8NBN7 331 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 DBF4BQ8NFT6 615 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 BORCS6Q96GS4 357 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 TUBGCP2Q9BSJ2 902 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 EIF2AQ9BY44 585 aaKnown RBP14.39□□□□□ -0.11
SNX12-205ENST00000490561 ASB7Q9H672 318 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 GRPEL1Q9HAV7 217 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 IPPQ9Y573 584 aa14.39□□□□□ -0.11
SNX12-205ENST00000490561 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.11
SNX12-205ENST00000490561 ABHD14A-ACY1A0A1B0GW23 586 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 ADRB2P07550 413 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 ITGA4P13612 1032 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 COPB1P53618 953 aaKnown RBP14.38□□□□□ -0.11
SNX12-205ENST00000490561 FANCCQ00597 558 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 GPNMBQ14956 572 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 KRT31Q15323 416 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 EEF2KMTQ96G04 330 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 ELAC1Q9H777 363 aaKnown RBP14.38□□□□□ -0.11
SNX12-205ENST00000490561 IL23AQ9NPF7 189 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 GIT1Q9Y2X7 761 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 DERAQ9Y315 318 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 NR2E3Q9Y5X4 410 aa14.38□□□□□ -0.11
SNX12-205ENST00000490561 C9IYK1 514 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 P4HA2O15460 535 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 HOXA2O43364 376 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 XPOTO43592 962 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 MGEA5O60502 916 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 BAIAP3O94812 1187 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 ATP1A3P13637 1013 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 FAM189BP81408 668 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 FPGSQ05932 587 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 CETN1Q12798 172 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 ENOX2Q16206 610 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 VWA3BQ502W6 1294 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 HSP90AA4PQ58FG1 418 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 DCAF17Q5H9S7 520 aaPredicted RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 TCERG1LQ5VWI1 586 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 DEFB128Q7Z7B8 93 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 ECHDC2Q86YB7 292 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 WDR49Q8IV35 697 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 SMG8Q8ND04 991 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 PARD3BQ8TEW8 1205 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 CACTINQ8WUQ7 758 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 ANP32BQ92688 251 aaKnown RBP14.37□□□□□ -0.11
SNX12-205ENST00000490561 DPF3Q92784 378 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 CGRRF1Q99675 332 aa14.37□□□□□ -0.11
SNX12-205ENST00000490561 OSBPL7Q9BZF2 842 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms