RNA–Protein interactions for RNA: ENST00000490500.5

RBBP4-213, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-213	ENST00000490500	NARS	O43776	548 aa	Known RBP	13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	TADA2A	O75478	443 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	RPL17	P18621	184 aa	Known RBP	13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	AOC1	P19801	751 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	RPA1	P27694	616 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	NBL1	P41271	181 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	GUCY1B3	Q02153	619 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	TUSC3	Q13454	348 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	ZNF174	Q15697	407 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	NAB2	Q15742	525 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	RTP2	Q5QGT7	225 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	PADI6	Q6TGC4	694 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	SLC44A3	Q8N4M1	653 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	FLCN	Q8NFG4	579 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	STAM	Q92783	540 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	PRKD2	Q9BZL6	878 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	CCDC113	Q9H0I3	377 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	USP20	Q9Y2K6	914 aa		13.71	□□□□□ -0.21
RBBP4-213	ENST00000490500	GVINP1	Q7Z2Y8	2422 aa		13.71	□□□□□ -0.22
RBBP4-213	ENST00000490500	DMD	P11532	3685 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	ACKR2	O00590	384 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	SEC24B	O95487	1268 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	EDN1	P05305	212 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	OR52Z1	P0C646	297 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	GBP2	P32456	591 aa	Predicted RBP	13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	NAMPT	P43490	491 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	ORC2	Q13416	577 aa	Predicted RBP	13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	SAFB	Q15424	915 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	ECM1	Q16610	540 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	GLYCTK	Q8IVS8	523 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	ZBTB8OS	Q8IWT0	167 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	SIX5	Q8N196	739 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	NXPE3	Q969Y0	559 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	C2orf40	Q9H1Z8	148 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	PPP4R2	Q9NY27	417 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	SNTG2	Q9NY99	539 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	WNT16	Q9UBV4	365 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	VPS13A	Q96RL7	3174 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	DENND4A	Q7Z401	1863 aa		13.7	□□□□□ -0.22
RBBP4-213	ENST00000490500	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	2e-11	■■■■■ 38.3
RBBP4-213	ENST00000490500	KRBA1	A5PL33	1030 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	CASTOR2	A6NHX0	329 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	ANHX	E9PGG2	379 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	N4BP3	O15049	544 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	ZMYND10	O75800	440 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	RECQL4	O94761	1208 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	KIF4A	O95239	1232 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	PRKCB	P05771	671 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	NEFL	P07196	543 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	LAMP2	P13473	410 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	MUT	P22033	750 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	CREM	Q03060	361 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	PRPF4B	Q13523	1007 aa	Known RBP	13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	MAPK6	Q16659	721 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	EEF1DP3	Q658K8	133 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	ASCL5	Q7RTU5	278 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	NOSTRIN	Q8IVI9	506 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	CCDC105	Q8IYK2	499 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	C4orf32	Q8N8J7	132 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	LNX1	Q8TBB1	728 aa	Predicted RBP	13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	HASPIN	Q8TF76	798 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	PIK3R5	Q8WYR1	880 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	CLSTN3	Q9BQT9	956 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	TTPAL	Q9BTX7	342 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	FOXP1	Q9H334	677 aa	Predicted RBP	13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	FBXW11	Q9UKB1	542 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	FBXL21	Q9UKT6	434 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	LIMCH1	Q9UPQ0	1083 aa		13.69	□□□□□ -0.22
RBBP4-213	ENST00000490500	EP300	Q09472	2414 aa	Predicted RBP	13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	ARHGEF35	A5YM69	484 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	TH	P07101	528 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	FAM171A1	Q5VUB5	890 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	CCDC83	Q8IWF9	413 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	FBXO18	Q8NFZ0	1043 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	ERMN	Q8TAM6	284 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	DEPTOR	Q8TB45	409 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	C8orf76	Q96K31	380 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	RTP3	Q9BQQ7	232 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	LLPH	Q9BRT6	129 aa	Known RBP	13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	KIFC3	Q9BVG8	833 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	PIDD1	Q9HB75	910 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	POLD4	Q9HCU8	107 aa		13.68	□□□□□ -0.22
RBBP4-213	ENST00000490500	ARID2	Q68CP9	1835 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	PRR23A	A6NEV1	266 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	ADAM12	O43184	909 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	CFH	P08603	1231 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	SRF	P11831	508 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	IGFBP6	P24592	240 aa	Predicted RBP	13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	FXR2	P51116	673 aa	Known RBP eCLIP	13.67	□□□□□ -0.22	6e-7	■■■□□ 14.8
RBBP4-213	ENST00000490500	PPP2R5A	Q15172	486 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	TTC38	Q5R3I4	469 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	NT5DC1	Q5TFE4	455 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	CD300LG	Q6UXG3	332 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	FRMD5	Q7Z6J6	570 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	CEP57	Q86XR8	500 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	DTWD2	Q8NBA8	298 aa		13.67	□□□□□ -0.22
RBBP4-213	ENST00000490500	ADPGK	Q9BRR6	497 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms