RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 FBXW11Q9UKB1 542 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 CDH7Q9ULB5 785 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 KCNJ14Q9UNX9 436 aa15.53■□□□□ 0.08
VARS-227ENST00000489979 PATJQ8NI35 1801 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 CCDC194A0A1B0GVG4 234 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 CPLX1O14810 134 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 MARCH6O60337 910 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 CCNT1O60563 726 aaKnown RBP15.52■□□□□ 0.08
VARS-227ENST00000489979 NPTXRO95502 500 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 GRIK3Q13003 919 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.08
VARS-227ENST00000489979 TFDP1Q14186 410 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 MLF2Q15773 248 aaPredicted RBP15.52■□□□□ 0.08
VARS-227ENST00000489979 PPP4R3AQ6IN85 833 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 NEK8Q86SG6 692 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 DDX23Q9BUQ8 820 aaKnown RBP15.52■□□□□ 0.08
VARS-227ENST00000489979 BCO2Q9BYV7 579 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 PARP2Q9UGN5 583 aa15.52■□□□□ 0.08
VARS-227ENST00000489979 MTF2Q9Y483 593 aaPredicted RBP15.52■□□□□ 0.08
VARS-227ENST00000489979 TPRP12270 2363 aaKnown RBP15.51■□□□□ 0.07
VARS-227ENST00000489979 SF3B1O75533 1304 aaKnown RBP eCLIP15.51■□□□□ 0.07
VARS-227ENST00000489979 B4GALT5O43286 388 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 LAMTOR5O43504 91 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 GCFC2P16383 781 aaKnown RBP15.51■□□□□ 0.07
VARS-227ENST00000489979 POU5F1BQ06416 359 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 CAPSQ13938 189 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 HSP90AA2PQ14568 343 aaPredicted RBP15.51■□□□□ 0.07
VARS-227ENST00000489979 UBXN2BQ14CS0 331 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 ZNF528Q3MIS6 628 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 SLC44A4Q53GD3 710 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 PPM1LQ5SGD2 360 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
VARS-227ENST00000489979 LIN9Q5TKA1 542 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 MTSS1LQ765P7 747 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 TPH2Q8IWU9 490 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 FAM177A1Q8N128 213 aaPredicted RBP15.51■□□□□ 0.07
VARS-227ENST00000489979 HASPINQ8TF76 798 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 FGF13Q92913 245 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 CLSTN3Q9BQT9 956 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 PAAF1Q9BRP4 392 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 LARP6Q9BRS8 491 aaKnown RBP15.51■□□□□ 0.07
VARS-227ENST00000489979 FBXO4Q9UKT5 387 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 SPTBN2O15020 2390 aa15.51■□□□□ 0.07
VARS-227ENST00000489979 FAM170BA6NMN3 283 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 TBX3O15119 743 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 CCL16O15467 120 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 SLITRK3O94933 977 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 C8AP07357 584 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 HNRNPA1P09651 372 aaKnown RBP eCLIP15.5■□□□□ 0.07
VARS-227ENST00000489979 ARL2P36404 184 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 PRKCQQ04759 706 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 CSTF1Q05048 431 aaKnown RBP15.5■□□□□ 0.07
VARS-227ENST00000489979 STK3Q13188 491 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 PSMD5Q16401 504 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 SLC27A1Q6PCB7 646 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 ITFG1Q8TB96 612 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 LNX1Q8TBB1 728 aaPredicted RBP15.5■□□□□ 0.07
VARS-227ENST00000489979 TTPALQ9BTX7 342 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 NCDNQ9UBB6 729 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 POLIQ9UNA4 740 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 NOTCH4Q99466 2003 aa15.5■□□□□ 0.07
VARS-227ENST00000489979 ZMYM2Q9UBW7 1377 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 A0A1B0GUA9 196 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 CASTOR2A6NHX0 329 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 SPTLC1O15269 473 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 ADAM12O43184 909 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 CD72P21854 359 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 GLRA2P23416 452 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 SPIRE1Q08AE8 756 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 TUSC3Q13454 348 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 CPLX2Q6PUV4 134 aaKnown RBP15.49■□□□□ 0.07
VARS-227ENST00000489979 PIK3AP1Q6ZUJ8 805 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 RUFY3Q7L099 469 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 ATRIPQ8WXE1 791 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 PIK3R5Q8WYR1 880 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 ZNF274Q96GC6 653 aaPredicted RBP15.49■□□□□ 0.07
VARS-227ENST00000489979 BORCS6Q96GS4 357 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 CNTNAP3BQ96NU0 1288 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 KXD1Q9BQD3 176 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 PHF20Q9BVI0 1012 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 NFKBIZQ9BYH8 718 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 CNTNAP3Q9BZ76 1288 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 OSBPL6Q9BZF3 934 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 LTB4R2Q9NPC1 389 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 VWA8A3KMH1 1905 aa15.49■□□□□ 0.07
VARS-227ENST00000489979 XYLBO75191 536 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 DGAT1O75907 488 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 KIF4AO95239 1232 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 HOXA9P31269 272 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 PFKPQ01813 784 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 SLFN12Q8IYM2 578 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 OXER1Q8TDS5 423 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 NAP1L4Q99733 375 aaKnown RBP15.48■□□□□ 0.07
VARS-227ENST00000489979 EIF2AK1Q9BQI3 630 aaKnown RBP15.48■□□□□ 0.07
VARS-227ENST00000489979 ZSWIM6Q9HCJ5 1215 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 PCDHGA2Q9Y5H1 932 aa15.48■□□□□ 0.07
VARS-227ENST00000489979 EPG5Q9HCE0 2579 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms