RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 PCSK1P29120 753 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 WASP42768 502 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 SLC25A3Q00325 362 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 TOB2Q14106 344 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-206ENST00000489868 DCAF17Q5H9S7 520 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-206ENST00000489868 NAIF1Q69YI7 327 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-206ENST00000489868 IGFL4Q6B9Z1 124 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 FAM83AQ86UY5 434 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 PNMA8AQ86V59 439 aaPredicted RBP6.99□□□□□ -1.29
CCDC39-206ENST00000489868 CACTINQ8WUQ7 758 aaKnown RBP6.99□□□□□ -1.29
CCDC39-206ENST00000489868 RAB24Q969Q5 203 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 ZNF747Q9BV97 191 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 IPPQ9Y573 584 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 PNPLA7Q6ZV29 1317 aa6.99□□□□□ -1.29
CCDC39-206ENST00000489868 CXorf49A8MYA2 514 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-206ENST00000489868 AMHP03971 560 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 FLT3LGP49771 235 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 IGBP1P78318 339 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 CNGB1Q14028 1251 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-206ENST00000489868 VPS72Q15906 364 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 BMT2Q1RMZ1 405 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 C3orf36Q3SXR2 165 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 FAM47AQ5JRC9 791 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 AFMIDQ63HM1 303 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 RNF169Q8NCN4 708 aa6.98□□□□□ -1.29
CCDC39-206ENST00000489868 UHRF1Q96T88 793 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-206ENST00000489868 ZNF703Q9H7S9 590 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-206ENST00000489868 AJAP1Q9UKB5 411 aaPredicted RBP6.98□□□□□ -1.29
CCDC39-206ENST00000489868 TBKBP1A7MCY6 615 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 LEFTY2O00292 366 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 HTRA2O43464 458 aaPredicted RBP6.97□□□□□ -1.29
CCDC39-206ENST00000489868 ENDOD1O94919 500 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 PDGFRBP09619 1106 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 ALDH1A3P47895 512 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 PER3P56645 1201 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 KIF23Q02241 960 aaPredicted RBP6.97□□□□□ -1.29
CCDC39-206ENST00000489868 FOXE3Q13461 319 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 MIIPQ5JXC2 388 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 PDZD4Q76G19 769 aaPredicted RBP6.97□□□□□ -1.29
CCDC39-206ENST00000489868 Q8N1X5 172 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC39-206ENST00000489868 CCHCR1Q8TD31 782 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 COA7Q96BR5 231 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 LANCL2Q9NS86 450 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 TYW1Q9NV66 732 aaKnown RBP6.97□□□□□ -1.29
CCDC39-206ENST00000489868 SLC23A1Q9UHI7 598 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 MRFAP1Q9Y605 127 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 ACTL7AQ9Y615 435 aa6.97□□□□□ -1.29
CCDC39-206ENST00000489868 FAM171A2A8MVW0 826 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 B5MCH6 92 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 NEK2P51955 445 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 ATP8B2P98198 1209 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 SP140Q13342 867 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 IL10RAQ13651 578 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 METTL24Q5JXM2 366 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 EFCAB2Q5VUJ9 269 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 CRIP3Q6Q6R5 217 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 FAM180AQ6UWF9 173 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 DBX2Q6ZNG2 339 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 PLEKHG4BQ96PX9 1271 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 MYOCQ99972 504 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 SENP6Q9GZR1 1112 aaPredicted RBP6.96□□□□□ -1.3
CCDC39-206ENST00000489868 SPON1Q9HCB6 807 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 HDAC5Q9UQL6 1122 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 SPEF1Q9Y4P9 236 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 PCDHA13Q9Y5I0 950 aa6.96□□□□□ -1.3
CCDC39-206ENST00000489868 FAM20BO75063 409 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 HSP90B1P14625 803 aaKnown RBP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 NCLP19338 710 aaKnown RBP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 APOBEC3AP31941 199 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 TARDBPQ13148 414 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 MTM1Q13496 603 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 GJC2Q5T442 439 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 FNDC7Q5VTL7 733 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 RHOT1Q8IXI2 618 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 CMTR2Q8IYT2 770 aaKnown RBP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 CHMP4CQ96CF2 233 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 NEU1Q99519 415 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 C7orf25Q9BPX7 421 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 VPS11Q9H270 941 aa6.95□□□□□ -1.3
CCDC39-206ENST00000489868 AURKAIP1Q9NWT8 199 aaPredicted RBP6.95□□□□□ -1.3
CCDC39-206ENST00000489868 CCDC154A6NI56 674 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 GOLGA6L6A8MZA4 724 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 PRR5-ARHGAP8B1AHC4 643 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 ALDH1L1O75891 902 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 NR4A1P22736 598 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 METRNLQ641Q3 311 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 DRICH1Q6PGQ1 229 aaPredicted RBP6.94□□□□□ -1.3
CCDC39-206ENST00000489868 OR10H5Q8NGA6 315 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 TFAP2CQ92754 450 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 KAT5Q92993 513 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 NDC1Q9BTX1 674 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 MRI1Q9BV20 369 aa6.94□□□□□ -1.3
CCDC39-206ENST00000489868 ZNF768Q9H5H4 540 aaKnown RBP6.94□□□□□ -1.3
CCDC39-206ENST00000489868 RUVBL1Q9Y265 456 aaKnown RBP6.94□□□□□ -1.3
CCDC39-206ENST00000489868 LUC7L2Q9Y383 392 aaKnown RBP6.94□□□□□ -1.3
CCDC39-206ENST00000489868 AHRRA9YTQ3 701 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 PJA2O43164 708 aa6.93□□□□□ -1.3
CCDC39-206ENST00000489868 GPR32O75388 356 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms