RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-233ENST00000489352 GPR62Q9BZJ7 368 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 ZBTB47Q9UFB7 747 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-233ENST00000489352 RAI2Q9Y5P3 530 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 THADAQ6YHU6 1953 aa12.98□□□□□ -0.33
HDAC6-233ENST00000489352 CELSR3Q9NYQ7 3312 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 COL4A2P08572 1712 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 A0A087WZ62 844 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 SPAARA0A1B0GVQ0 90 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 BCLAF3A2AJT9 711 aaKnown RBP12.97□□□□□ -0.33
HDAC6-233ENST00000489352 TK2O00142 265 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 RHOP08100 348 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 ITGA4P13612 1032 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 MLLT6P55198 1093 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-233ENST00000489352 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-233ENST00000489352 SEC23AQ15436 765 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 CATIPQ7Z7H3 387 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 SYNPOQ8N3V7 929 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 LINC01465Q8N7H1 131 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 FDXACB1Q9BRP7 624 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-233ENST00000489352 C8orf33Q9H7E9 229 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-233ENST00000489352 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 ADAM28Q9UKQ2 775 aa12.97□□□□□ -0.33
HDAC6-233ENST00000489352 PIEZO2Q9H5I5 2752 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 FAM221BA6H8Z2 402 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 F8W810 466 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 POU2F2P09086 479 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 GBP1P32455 592 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 TRDNQ13061 729 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 FAM78AQ5JUQ0 283 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.33
HDAC6-233ENST00000489352 CNNM3Q8NE01 707 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 DEPDC1BQ8WUY9 529 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 HNRNPABQ99729 332 aaKnown RBP12.96□□□□□ -0.33
HDAC6-233ENST00000489352 C2orf42Q9NWW7 574 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 PCDHA10Q9Y5I2 948 aa12.96□□□□□ -0.33
HDAC6-233ENST00000489352 USP9XQ93008 2570 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 SF3B1O75533 1304 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF462Q96JM2 2506 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 URB1O60287 2271 aaKnown RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 SLC38A8A6NNN8 435 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 J3QKU1 62 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 CDX4O14627 284 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF197O14709 1029 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 IFIT3O14879 490 aaKnown RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 MAP3K13O43283 966 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 EXTL3O43909 919 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 ATG13O75143 517 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 EFEMP2O95967 443 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 CAPNS1P04632 268 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 CEBPBP17676 345 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 PTPN2P17706 415 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 KARSQ15046 597 aaKnown RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 PSMD5Q16401 504 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 PDXDC1Q6P996 788 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 RTL10Q7L3V2 364 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF410Q86VK4 478 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 RHPN2Q8IUC4 686 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 SMAP1Q8IYB5 467 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 CTCFLQ8NI51 663 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 CLSTN3Q9BQT9 956 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 TTPALQ9BTX7 342 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 SPZ1Q9BXG8 430 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 DUSP15Q9H1R2 295 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-233ENST00000489352 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
HDAC6-233ENST00000489352 CACNA1EQ15878 2313 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 ARL5CA6NH57 179 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 IPO5O00410 1097 aaKnown RBP12.94□□□□□ -0.34
HDAC6-233ENST00000489352 MEIS1O00470 390 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 ARHGAP6O43182 974 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 LRG1P02750 347 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 OATP04181 439 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 FCARP24071 287 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 HOXC13P31276 330 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 LMAN2Q12907 356 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 SART3Q15020 963 aaKnown RBP12.94□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF423Q2M1K9 1284 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 SLC5A9Q2M3M2 681 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-233ENST00000489352 VITQ6UXI7 678 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 PLA2G4DQ86XP0 818 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 TICAM2Q86XR7 235 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 OTUD7AQ8TE49 926 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-233ENST00000489352 PIK3R5Q8WYR1 880 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 NLRP4Q96MN2 994 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 GAD1Q99259 594 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 TBC1D22BQ9NU19 505 aa12.94□□□□□ -0.34
HDAC6-233ENST00000489352 KIF26AQ9ULI4 1882 aaPredicted RBP12.93□□□□□ -0.34
HDAC6-233ENST00000489352 APC2O95996 2303 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 MLH1P40692 756 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 SCNN1GP51170 649 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 DSC1Q08554 894 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 PON2Q15165 354 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
HDAC6-233ENST00000489352 FAM171A1Q5VUB5 890 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms