RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ERVK-21P61565 698 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 TAP1Q03518 808 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 RNASELQ05823 741 aaKnown RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 NOLC1Q14978 699 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 AGMOQ6ZNB7 445 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 EPM2AIP1Q7L775 607 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 HS2ST1Q7LGA3 356 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 ZBTB33Q86T24 672 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 CD302Q8IX05 232 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 LRRC43Q8N309 656 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 HELQQ8TDG4 1101 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 LPPQ93052 612 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 NECAB3Q96P71 396 aaPredicted RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 MSTO1Q9BUK6 570 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 GBP3Q9H0R5 595 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 PLEKHA5Q9HAU0 1116 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 KIAA1586Q9HCI6 787 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 SLC39A2Q9NP94 309 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 LMBRD1Q9NUN5 540 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 TYW1Q9NV66 732 aaKnown RBP13.59□□□□□ -0.23
COL4A5-206ENST00000489230 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 STK39Q9UEW8 545 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 USP20Q9Y2K6 914 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 MICAL3Q7RTP6 2002 aa13.59□□□□□ -0.23
COL4A5-206ENST00000489230 NCOR1O75376 2440 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 OGTO15294 1046 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 PRPF6O94906 941 aaKnown RBP13.58□□□□□ -0.24
COL4A5-206ENST00000489230 ALDH2P05091 517 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 LAG3P18627 525 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 PTMSP20962 102 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 PPP1R2P41236 205 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 ALDH7A1P49419 539 aaKnown RBP13.58□□□□□ -0.24
COL4A5-206ENST00000489230 TFF2Q03403 129 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 STK4Q13043 487 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 PNOCQ13519 176 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.24
COL4A5-206ENST00000489230 BMT2Q1RMZ1 405 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 CLLU1OSQ5K130 101 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 TMEM192Q8IY95 271 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 THNSL1Q8IYQ7 743 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 SPATA20Q8TB22 786 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 POMGNT1Q8WZA1 660 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 ZBTB45Q96K62 511 aaPredicted RBP13.58□□□□□ -0.24
COL4A5-206ENST00000489230 RPS6KC1Q96S38 1066 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 APOL6Q9BWW8 343 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 CDT1Q9H211 546 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 NXF3Q9H4D5 531 aaKnown RBP13.58□□□□□ -0.24
COL4A5-206ENST00000489230 AGO2Q9UKV8 859 aaKnown RBP13.58□□□□□ -0.24
COL4A5-206ENST00000489230 MYH11P35749 1972 aa13.58□□□□□ -0.24
COL4A5-206ENST00000489230 ABLIM1O14639 778 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 MBD3O95983 291 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 EDN1P05305 212 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 THP07101 528 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 BMP1P13497 986 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 AKAP5P24588 427 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 CASP5P51878 434 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 PAN2Q504Q3 1202 aaKnown RBP13.57□□□□□ -0.24
COL4A5-206ENST00000489230 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 GAD1Q99259 594 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 TMEM175Q9BSA9 504 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
COL4A5-206ENST00000489230 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 SLC38A7Q9NVC3 462 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 INPP5FQ9Y2H2 1132 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 HES2Q9Y543 173 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 PCDHA5Q9Y5H7 936 aa13.57□□□□□ -0.24
COL4A5-206ENST00000489230 TCF20Q9UGU0 1960 aaKnown RBP13.57□□□□□ -0.24
COL4A5-206ENST00000489230 LCHNA4D1U4 455 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 ANKRD63C9JTQ0 380 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 PDXKO00764 312 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 RECQL4O94761 1208 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 HARSP12081 509 aaKnown RBP13.56□□□□□ -0.24
COL4A5-206ENST00000489230 PPM1AP35813 382 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 KCNQ1P51787 676 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 KRT17Q04695 432 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 KCNA1Q09470 495 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 STIM1Q13586 685 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 MYBPC2Q14324 1141 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
COL4A5-206ENST00000489230 EPC2Q52LR7 807 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 ZNF658Q5TYW1 1059 aaPredicted RBP13.56□□□□□ -0.24
COL4A5-206ENST00000489230 ALKAL1Q6UXT8 129 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
COL4A5-206ENST00000489230 TMEM174Q8WUU8 243 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 P2RX5Q93086 422 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 ZNF558Q96NG5 402 aa13.56□□□□□ -0.24
COL4A5-206ENST00000489230 C11orf84Q9BUA3 381 aaPredicted RBP13.56□□□□□ -0.24
COL4A5-206ENST00000489230 TBC1D13Q9NVG8 400 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms