RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 NCKAP1LP55160 1127 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 DLX2Q07687 328 aaPredicted RBP26.33■■□□□ 1.81
PTPN18-213ENST00000489215 TUSC3Q13454 348 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 ZNF568Q3ZCX4 644 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 SPECC1Q5M775 1068 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 MPZL3Q6UWV2 235 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 CASP10Q92851 521 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 CLIC6Q96NY7 704 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 TARS2Q9BW92 718 aaKnown RBP26.33■■□□□ 1.81
PTPN18-213ENST00000489215 EMILIN2Q9BXX0 1053 aa26.33■■□□□ 1.81
PTPN18-213ENST00000489215 MRPL17Q9NRX2 175 aaKnown RBP26.33■■□□□ 1.81
PTPN18-213ENST00000489215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.32■■□□□ 1.8
PTPN18-213ENST00000489215 B4GALT3O60512 393 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 TOM1L1O75674 476 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 BRD1O95696 1058 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 F13A1P00488 732 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 SOD2P04179 222 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 GRM5P41594 1212 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 KCNC3Q14003 757 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 SV2BQ7L1I2 683 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 TAS1R3Q7RTX0 852 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 HAUS6Q7Z4H7 955 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 FAM178BQ8IXR5 827 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 CLEC1BQ9P126 229 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 CFAP45Q9UL16 551 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 USP20Q9Y2K6 914 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 GDAQ9Y2T3 454 aa26.32■■□□□ 1.8
PTPN18-213ENST00000489215 PRG3Q9Y2Y8 225 aaPredicted RBP26.32■■□□□ 1.8
PTPN18-213ENST00000489215 NPHP3-ACAD11A0A0J9YXS1 232 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 MBTPS2O43462 519 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 TRAK2O60296 914 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 IL9P15248 144 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 PROZP22891 400 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 SMAD2Q15796 467 aaKnown RBP26.31■■□□□ 1.8
PTPN18-213ENST00000489215 USP49Q70CQ1 688 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 GPR65Q8IYL9 337 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 BCL7CQ8WUZ0 217 aaPredicted RBP26.31■■□□□ 1.8
PTPN18-213ENST00000489215 POP1Q99575 1024 aaKnown RBP26.31■■□□□ 1.8
PTPN18-213ENST00000489215 CDT1Q9H211 546 aa26.31■■□□□ 1.8
PTPN18-213ENST00000489215 GLP2RO95838 553 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 URODP06132 367 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 CACNB1Q02641 598 aaPredicted RBP26.3■■□□□ 1.8
PTPN18-213ENST00000489215 SMRP1Q8NCR6 262 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 ACAP3Q96P50 834 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 HERC2P3Q9BVR0 1158 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 ZHX3Q9H4I2 956 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 MARCH5Q9NX47 278 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 TFIP11Q9UBB9 837 aaKnown RBP26.3■■□□□ 1.8
PTPN18-213ENST00000489215 ADAM28Q9UKQ2 775 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 NCOR1O75376 2440 aa26.3■■□□□ 1.8
PTPN18-213ENST00000489215 TTC28Q96AY4 2481 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 CLDN3O15551 220 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 TADA2AO75478 443 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 STAT6P42226 847 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 KYAT1Q16773 422 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 TPRNQ4KMQ1 711 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 KIAA1841Q6NSI8 718 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 KCNG4Q8TDN1 519 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 BICD1Q96G01 975 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 LRRC27Q9C0I9 530 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 SLC38A7Q9NVC3 462 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 BARX2Q9UMQ3 279 aaPredicted RBP26.29■■□□□ 1.8
PTPN18-213ENST00000489215 VCANP13611 3396 aa26.29■■□□□ 1.8
PTPN18-213ENST00000489215 PTGESO14684 152 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 CUTAO60888 179 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 CLASP2O75122 1294 aaKnown RBP26.28■■□□□ 1.8
PTPN18-213ENST00000489215 HSP90AA2PQ14568 343 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-213ENST00000489215 PTPN14Q15678 1187 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 CLUL1Q15846 466 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 ANKRD54Q6NXT1 300 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 LRRC15Q8TF66 581 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 UROC1Q96N76 676 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 NECAB3Q96P71 396 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-213ENST00000489215 SEL1LQ9UBV2 794 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 DPP7Q9UHL4 492 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.28■■□□□ 1.8
PTPN18-213ENST00000489215 HCFC2Q9Y5Z7 792 aa26.28■■□□□ 1.8
PTPN18-213ENST00000489215 K7ENM7 598 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 EFEMP2O95967 443 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 GLUD2P49448 558 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 CREMQ03060 361 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 ELAVL2Q12926 359 aaKnown RBP26.27■■□□□ 1.8
PTPN18-213ENST00000489215 NOLC1Q14978 699 aaKnown RBP eCLIP26.27■■□□□ 1.8
PTPN18-213ENST00000489215 USP41Q3LFD5 358 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 ELMSAN1Q6PJG2 1045 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 ZBTB33Q86T24 672 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 ADHFE1Q8IWW8 467 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 RNF168Q8IYW5 571 aaPredicted RBP26.27■■□□□ 1.8
PTPN18-213ENST00000489215 SPRYD3Q8NCJ5 442 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 VN1R3Q9BXE9 311 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 CUEDC2Q9H467 287 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 ST6GALNAC4Q9H4F1 302 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.27■■□□□ 1.8
PTPN18-213ENST00000489215 DZANK1Q9NVP4 752 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 TBX20Q9UMR3 447 aa26.27■■□□□ 1.8
PTPN18-213ENST00000489215 SF3B1O75533 1304 aaKnown RBP eCLIP26.26■■□□□ 1.79
PTPN18-213ENST00000489215 C1RP00736 705 aa26.26■■□□□ 1.79
PTPN18-213ENST00000489215 GAP43P17677 238 aa26.26■■□□□ 1.79
PTPN18-213ENST00000489215 MATR3P43243 847 aaKnown RBP eCLIP26.26■■□□□ 1.791e-6■■■■□ 25.1
PTPN18-213ENST00000489215 LIG4P49917 911 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms