RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZBTB39O15060 712 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 NCAM2O15394 837 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 P4HBP07237 508 aaKnown RBP18.02■□□□□ 0.48
USP48-210ENST00000489108 C8AP07357 584 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 HMGB1P09429 215 aaKnown RBP18.02■□□□□ 0.48
USP48-210ENST00000489108 PTENP60484 403 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 NCBP1Q09161 790 aaKnown RBP18.02■□□□□ 0.48
USP48-210ENST00000489108 FZD5Q13467 585 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 EMC2Q15006 297 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 LNX1Q8TBB1 728 aaPredicted RBP18.02■□□□□ 0.48
USP48-210ENST00000489108 PAAF1Q9BRP4 392 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 C22orf23Q9BZE7 217 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 TRIM6Q9C030 488 aaPredicted RBP18.02■□□□□ 0.48
USP48-210ENST00000489108 SLKQ9H2G2 1235 aaPredicted RBP18.02■□□□□ 0.48
USP48-210ENST00000489108 SH3GLB2Q9NR46 395 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 HCFC1R1Q9NWW0 138 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 GMEB2Q9UKD1 530 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 PCDHA4Q9UN74 947 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 PPME1Q9Y570 386 aa18.02■□□□□ 0.48
USP48-210ENST00000489108 CACNA1GO43497 2377 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 INO80B-WBP1J3KQ70 363 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 ADAM12O43184 909 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 DKC1O60832 514 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP48-210ENST00000489108 RPS9P46781 194 aaKnown RBP18.01■□□□□ 0.47
USP48-210ENST00000489108 SPEM2Q0P670 501 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 MTAPQ13126 283 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 PPP2R5CQ13362 524 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 PCBP1Q15365 356 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP48-210ENST00000489108 CDR2LQ86X02 465 aaPredicted RBP18.01■□□□□ 0.47
USP48-210ENST00000489108 CEP57Q86XR8 500 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 HASPINQ8TF76 798 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 TTPALQ9BTX7 342 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 PLA2G2FQ9BZM2 168 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 PRMT8Q9NR22 394 aaPredicted RBP18.01■□□□□ 0.47
USP48-210ENST00000489108 PARP2Q9UGN5 583 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 DDX25Q9UHL0 483 aaKnown RBP18.01■□□□□ 0.47
USP48-210ENST00000489108 VAV3Q9UKW4 847 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 NID2Q14112 1375 aa18.01■□□□□ 0.47
USP48-210ENST00000489108 CFAP47Q6ZTR5 3102 aa18■□□□□ 0.47
USP48-210ENST00000489108 SLC37A4O43826 429 aa18■□□□□ 0.47
USP48-210ENST00000489108 XYLBO75191 536 aa18■□□□□ 0.47
USP48-210ENST00000489108 IFNAR1P17181 557 aa18■□□□□ 0.47
USP48-210ENST00000489108 ARF4P18085 180 aaPredicted RBP18■□□□□ 0.47
USP48-210ENST00000489108 HOXA9P31269 272 aa18■□□□□ 0.47
USP48-210ENST00000489108 YWHABP31946 246 aaKnown RBP18■□□□□ 0.47
USP48-210ENST00000489108 GRIK3Q13003 919 aa18■□□□□ 0.47
USP48-210ENST00000489108 HSP90AA2PQ14568 343 aaPredicted RBP18■□□□□ 0.47
USP48-210ENST00000489108 PSMD5Q16401 504 aa18■□□□□ 0.47
USP48-210ENST00000489108 LPAL2Q16609 132 aa18■□□□□ 0.47
USP48-210ENST00000489108 AMHR2Q16671 573 aa18■□□□□ 0.47
USP48-210ENST00000489108 XKR9Q5GH70 373 aa18■□□□□ 0.47
USP48-210ENST00000489108 FAM171A1Q5VUB5 890 aa18■□□□□ 0.47
USP48-210ENST00000489108 MOXD1Q6UVY6 613 aa18■□□□□ 0.47
USP48-210ENST00000489108 ZNF852Q6ZMS4 543 aa18■□□□□ 0.47
USP48-210ENST00000489108 NPAS3Q8IXF0 933 aa18■□□□□ 0.47
USP48-210ENST00000489108 C4orf19Q8IY42 314 aa18■□□□□ 0.47
USP48-210ENST00000489108 HACE1Q8IYU2 909 aa18■□□□□ 0.47
USP48-210ENST00000489108 ING5Q8WYH8 240 aa18■□□□□ 0.47
USP48-210ENST00000489108 FAM126AQ9BYI3 521 aaPredicted RBP18■□□□□ 0.47
USP48-210ENST00000489108 HEBP1Q9NRV9 189 aa18■□□□□ 0.47
USP48-210ENST00000489108 DNMT3BQ9UBC3 853 aaKnown RBP18■□□□□ 0.47
USP48-210ENST00000489108 DYNC1LI1Q9Y6G9 523 aaKnown RBP18■□□□□ 0.47
USP48-210ENST00000489108 SF3B1O75533 1304 aaKnown RBP eCLIP17.99■□□□□ 0.475e-6■■■■□ 20.1
USP48-210ENST00000489108 CHD8Q9HCK8 2581 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 SHISA7A6NL88 538 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 M0R2N6 131 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 NPTXRO95502 500 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 CCT2P78371 535 aaKnown RBP17.99■□□□□ 0.47
USP48-210ENST00000489108 ADCY1Q08828 1119 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 PPM1JQ5JR12 505 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 AXDND1Q5T1B0 1012 aaPredicted RBP17.99■□□□□ 0.47
USP48-210ENST00000489108 OTUD6AQ7L8S5 288 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 SLC7A14Q8TBB6 771 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 PIK3R5Q8WYR1 880 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 MCRS1Q96EZ8 462 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 MTRQ99707 1265 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 NCOA5Q9HCD5 579 aaKnown RBP17.99■□□□□ 0.47
USP48-210ENST00000489108 XPNPEP1Q9NQW7 623 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 RGL1Q9NZL6 768 aa17.99■□□□□ 0.47
USP48-210ENST00000489108 CASTOR2A6NHX0 329 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 B4GALT5O43286 388 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 MBTD1Q05BQ5 628 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 TUSC3Q13454 348 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 MXD4Q14582 209 aaPredicted RBP17.98■□□□□ 0.47
USP48-210ENST00000489108 INF2Q27J81 1249 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 PABPC1LQ4VXU2 614 aaKnown RBP17.98■□□□□ 0.47
USP48-210ENST00000489108 POTEHQ6S545 545 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 IFNLR1Q8IU57 520 aaPredicted RBP17.98■□□□□ 0.47
USP48-210ENST00000489108 FAM20AQ96MK3 541 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 LXNQ9BS40 222 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 RAB23Q9ULC3 237 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 KCNH3Q9ULD8 1083 aa17.98■□□□□ 0.47
USP48-210ENST00000489108 MRPS17Q9Y2R5 130 aaKnown RBP17.98■□□□□ 0.47
USP48-210ENST00000489108 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.97■□□□□ 0.47
USP48-210ENST00000489108 SLC30A4O14863 429 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 ECI2O75521 394 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 KIF4AO95239 1232 aa17.97■□□□□ 0.47
USP48-210ENST00000489108 TDGF1P13385 188 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms