RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 RCCD1A6NED2 376 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 OGTO15294 1046 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 SOX5P35711 763 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 VAV2P52735 878 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 PURAQ00577 322 aaKnown RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 CYP27A1Q02318 531 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 KLHL30Q0D2K2 578 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 HIC1Q14526 733 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 DRAP1Q14919 205 aaPredicted RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ZACNQ401N2 412 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ARHGAP29Q52LW3 1261 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 FBXL13Q8NEE6 735 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 OLIG1Q8TAK6 271 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 TAS1R2Q8TE23 839 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 CGRRF1Q99675 332 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 HAUS4Q9H6D7 363 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 TNFSF13BQ9Y275 285 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 BZW2Q9Y6E2 419 aaKnown RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 FRMPD3Q5JV73 1810 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 SMIM35A0A1B0GVV1 85 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 AKR1B10O60218 316 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ZEB2O60315 1214 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 IPO7O95373 1038 aaKnown RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 MYL3P08590 195 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 PNMA6AP0CW24 399 aaPredicted RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 FERP16591 822 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ANXA13P27216 316 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 TNFSF9P41273 254 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 STAT1P42224 750 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 MATR3P43243 847 aaKnown RBP eCLIP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 TERF1P54274 439 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ARID5AQ03989 594 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 PTK2Q05397 1052 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 TRIM32Q13049 653 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 EEF1DP3Q658K8 133 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ZBTB33Q86T24 672 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF784Q8NCA9 323 aaPredicted RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF592Q92610 1267 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 VTI1AQ96AJ9 217 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 FNBP1Q96RU3 617 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 WDR24Q96S15 920 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 KATNAL1Q9BW62 490 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 IRX2Q9BZI1 471 aaPredicted RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 DEF6Q9H4E7 631 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 RNF186Q9NXI6 227 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 CPSF3Q9UKF6 684 aaKnown RBP10.22□□□□□ -0.77
SF3B1-211ENST00000487698 NENFQ9UMX5 172 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 PCNTO95613 3336 aa10.22□□□□□ -0.77
SF3B1-211ENST00000487698 MYH10P35580 1976 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 SEPT4O43236 478 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 EVI5O60447 810 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 C4BPAP04003 597 aaKnown RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 HARSP12081 509 aaKnown RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 MAP2K2P36507 400 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 GFPT1Q06210 699 aaPredicted RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 KIF22Q14807 665 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 SPA17Q15506 151 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 SLC18A3Q16572 532 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF568Q3ZCX4 644 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 SEZ6Q53EL9 994 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 TDRD10Q5VZ19 366 aaKnown RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 ZNF571Q7Z3V5 609 aaPredicted RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 SRGAP1Q7Z6B7 1085 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 FMNL3Q8IVF7 1028 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 HELQQ8TDG4 1101 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 FAM84AQ96KN4 292 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 PPP1R16BQ96T49 567 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 SYT11Q9BT88 431 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 TCHPQ9BT92 498 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 IFIH1Q9BYX4 1025 aaKnown RBP10.21□□□□□ -0.77
SF3B1-211ENST00000487698 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 CDT1Q9H211 546 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 ADAMTS10Q9H324 1103 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 RAB20Q9NX57 234 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 MYO1AQ9UBC5 1043 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 DNAI1Q9UI46 699 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 TFR2Q9UP52 801 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 PCDHA13Q9Y5I0 950 aa10.21□□□□□ -0.77
SF3B1-211ENST00000487698 HTTP42858 3142 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 TRIP11Q15643 1979 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 KIF5CO60282 957 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 KPNA6O60684 536 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 ZC3H11AO75152 810 aaKnown RBP eCLIP10.21□□□□□ -0.78
SF3B1-211ENST00000487698 GPR32O75388 356 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 TRPA1O75762 1119 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 GFPT2O94808 682 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 C6orf222P0C671 652 aaPredicted RBP10.21□□□□□ -0.78
SF3B1-211ENST00000487698 GNG11P61952 73 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 LMBRD2Q68DH5 695 aaPredicted RBP10.21□□□□□ -0.78
SF3B1-211ENST00000487698 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 KIAA1328Q86T90 577 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 PPP1R13LQ8WUF5 828 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 JAKMIP2Q96AA8 810 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 KREMEN1Q96MU8 473 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 PDZD7Q9H5P4 517 aa10.21□□□□□ -0.78
SF3B1-211ENST00000487698 UBE2TQ9NPD8 197 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms