RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 NDUFS2O75306 463 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 HSP90B1P14625 803 aaKnown RBP5.6□□□□□ -1.51
LINC00888-204ENST00000487386 ALOX15P16050 662 aaPredicted RBP5.6□□□□□ -1.51
LINC00888-204ENST00000487386 IBSPP21815 317 aaPredicted RBP5.6□□□□□ -1.51
LINC00888-204ENST00000487386 DGCR2P98153 550 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 SLC25A3Q00325 362 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 SP140Q13342 867 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 CLUL1Q15846 466 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 PQLC1Q8N2U9 271 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 NRG4Q8WWG1 115 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 HDAC5Q9UQL6 1122 aa5.6□□□□□ -1.51
LINC00888-204ENST00000487386 FAM171A2A8MVW0 826 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 CXorf49A8MYA2 514 aaPredicted RBP5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PJA2O43164 708 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 ENDOD1O94919 500 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PEX11BO96011 259 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 TACR2P21452 398 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PTPN7P35236 360 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PTH1RQ03431 593 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PPM1NQ8N819 430 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.59□□□□□ -1.51
LINC00888-204ENST00000487386 SLC35B2Q8TB61 432 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PGBD4Q96DM1 585 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 TEKT5Q96M29 485 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PLEKHG4BQ96PX9 1271 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PARPBPQ9NWS1 579 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 DNM3Q9UQ16 869 aa5.59□□□□□ -1.51
LINC00888-204ENST00000487386 PNPLA7Q6ZV29 1317 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 PRR5-ARHGAP8B1AHC4 643 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 IL2RBP14784 551 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 ZXDAP98168 799 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 EXOSC10Q01780 885 aaKnown RBP5.58□□□□□ -1.52
LINC00888-204ENST00000487386 ODF1Q14990 250 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 ACAP2Q15057 778 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 PTPN21Q16825 1174 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 RABL3Q5HYI8 236 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 FNDC7Q5VTL7 733 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 SYT12Q8IV01 421 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 CASKIN2Q8WXE0 1202 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 DPF2Q92785 391 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 CYFIP2Q96F07 1278 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 NDC1Q9BTX1 674 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 LANCL2Q9NS86 450 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 TYW1Q9NV66 732 aaKnown RBP5.58□□□□□ -1.52
LINC00888-204ENST00000487386 FAM30AQ9NZY2 134 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 IPPQ9Y573 584 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 MRFAP1Q9Y605 127 aa5.58□□□□□ -1.52
LINC00888-204ENST00000487386 TRIM24O15164 1050 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 AMY1AP04745 511 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 EDNRBP24530 442 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 PER3P56645 1201 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 CLRN1P58418 232 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 ATP8B2P98198 1209 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 LSM12Q3MHD2 195 aaKnown RBP5.57□□□□□ -1.52
LINC00888-204ENST00000487386 IGFL4Q6B9Z1 124 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 OTUD7BQ6GQQ9 843 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 FBXO18Q8NFZ0 1043 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 STAG1Q8WVM7 1258 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 STON2Q8WXE9 905 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 UHRF1Q96T88 793 aaPredicted RBP5.57□□□□□ -1.52
LINC00888-204ENST00000487386 LDAHQ9H6V9 325 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 INTUQ9ULD6 942 aa5.57□□□□□ -1.52
LINC00888-204ENST00000487386 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 AHRRA9YTQ3 701 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 XPOTO43592 962 aaKnown RBP5.56□□□□□ -1.52
LINC00888-204ENST00000487386 NARSO43776 548 aaKnown RBP5.56□□□□□ -1.52
LINC00888-204ENST00000487386 C6P13671 934 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 PCSK1P29120 753 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 TUBA3CQ13748 450 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 AFMIDQ63HM1 303 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 METRNLQ641Q3 311 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 EFCAB12Q6NXP0 572 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 TUBA3EQ6PEY2 450 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 ZGPATQ8N5A5 531 aaKnown RBP5.56□□□□□ -1.52
LINC00888-204ENST00000487386 TFAP2CQ92754 450 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 COA7Q96BR5 231 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 C7orf25Q9BPX7 421 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 SENP6Q9GZR1 1112 aaPredicted RBP5.56□□□□□ -1.52
LINC00888-204ENST00000487386 MANSC1Q9H8J5 431 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 SPON1Q9HCB6 807 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 MOCS1Q9NZB8 636 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 AJAP1Q9UKB5 411 aaPredicted RBP5.56□□□□□ -1.52
LINC00888-204ENST00000487386 LIMCH1Q9UPQ0 1083 aa5.56□□□□□ -1.52
LINC00888-204ENST00000487386 NPIPB8E9PQR5 432 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 LEFTY2O00292 366 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 HTRA2O43464 458 aaPredicted RBP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 ZRANB2O95218 330 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 SNRPA1P09661 255 aaKnown RBP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 FPR1P21462 350 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 NR4A1P22736 598 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 MGAT1P26572 445 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 APOBEC3AP31941 199 aaPredicted RBP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 ACVRL1P37023 503 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 SLC16A1P53985 500 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 ANAPC15P60006 121 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 MTM1Q13496 603 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 EFCAB2Q5VUJ9 269 aa5.55□□□□□ -1.52
LINC00888-204ENST00000487386 PNMA8AQ86V59 439 aaPredicted RBP5.55□□□□□ -1.52
LINC00888-204ENST00000487386 OR10H5Q8NGA6 315 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms