RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 NT5DC1Q5TFE4 455 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 KIAA1841Q6NSI8 718 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 ANKRD54Q6NXT1 300 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 FAM173BQ6P4H8 233 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 SPIRE2Q8WWL2 714 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 RAD54LQ92698 747 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 BICD1Q96G01 975 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 REEP2Q9BRK0 252 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 CCDC94Q9BW85 323 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-208ENST00000486404 APOL5Q9BWW9 433 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 VN1R3Q9BXE9 311 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 ZHX3Q9H4I2 956 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 TMEM134Q9H6X4 195 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 TOPORSQ9NS56 1045 aaPredicted RBP14.15□□□□□ -0.14
CHMP3-208ENST00000486404 DZANK1Q9NVP4 752 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 MARCH5Q9NX47 278 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 LARSQ9P2J5 1176 aaKnown RBP14.15□□□□□ -0.14
CHMP3-208ENST00000486404 ODF2LQ9ULJ1 636 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 TNFSF13BQ9Y275 285 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 SSX2IPQ9Y2D8 614 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 HCFC2Q9Y5Z7 792 aa14.15□□□□□ -0.14
CHMP3-208ENST00000486404 SF3B1O75533 1304 aaKnown RBP eCLIP14.15□□□□□ -0.15
CHMP3-208ENST00000486404 NPHP3-ACAD11A0A0J9YXS1 232 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 CASTOR2A6NHX0 329 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 K7ENM7 598 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 SOD2P04179 222 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 THP07101 528 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 HOXB8P17481 243 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-208ENST00000486404 MCM6Q14566 821 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 HSP90AA2PQ14568 343 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-208ENST00000486404 STK38Q15208 465 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 PTPAQ15257 358 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 ZBTB33Q86T24 672 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 PPFIBP1Q86W92 1011 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 LARP4BQ92615 738 aaKnown RBP14.14□□□□□ -0.15
CHMP3-208ENST00000486404 ZNF396Q96N95 335 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-208ENST00000486404 TARS2Q9BW92 718 aaKnown RBP14.14□□□□□ -0.15
CHMP3-208ENST00000486404 CDT1Q9H211 546 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 MIOSQ9NXC5 875 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 FBXO2Q9UK22 296 aaPredicted RBP14.14□□□□□ -0.15
CHMP3-208ENST00000486404 IRAK3Q9Y616 596 aa14.14□□□□□ -0.15
CHMP3-208ENST00000486404 C2orf16Q68DN1 1984 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 MUC3AQ02505 3323 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 DENND4AQ7Z401 1863 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 MAPTP10636 758 aaKnown RBP14.13□□□□□ -0.15
CHMP3-208ENST00000486404 MCF2P10911 925 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 KLRC2P26717 231 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 OSTNP61366 133 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 NOLC1Q14978 699 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHMP3-208ENST00000486404 GLRA4Q5JXX5 417 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 SPECC1Q5M775 1068 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 CES5AQ6NT32 575 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 FUT10Q6P4F1 479 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 ELMSAN1Q6PJG2 1045 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 MPZL3Q6UWV2 235 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 TMEM184AQ6ZMB5 413 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 MYCT1Q8N699 235 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 KRI1Q8N9T8 703 aaKnown RBP14.13□□□□□ -0.15
CHMP3-208ENST00000486404 GSTCDQ8NEC7 633 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 USP28Q96RU2 1077 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 ACO2Q99798 780 aaKnown RBP14.13□□□□□ -0.15
CHMP3-208ENST00000486404 C1QTNF1Q9BXJ1 281 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 CCSER1Q9C0I3 900 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 PARVGQ9HBI0 331 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 ADAM28Q9UKQ2 775 aa14.13□□□□□ -0.15
CHMP3-208ENST00000486404 VWA8A3KMH1 1905 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 MTCL1Q9Y4B5 1905 aaKnown RBP14.12□□□□□ -0.15
CHMP3-208ENST00000486404 F8W810 466 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 PTGESO14684 152 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 TADA2AO75478 443 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 ADH1AP07327 375 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 EPCAMP16422 314 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 SCP2P22307 547 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 GRM5P41594 1212 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 CREMQ03060 361 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 CBX2Q14781 532 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-208ENST00000486404 FOXD4L5Q5VV16 416 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-208ENST00000486404 RRAGBQ5VZM2 374 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 TAS1R3Q7RTX0 852 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 TMEM161BQ8NDZ6 487 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 HASPINQ8TF76 798 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 FOXD4L4Q8WXT5 416 aaPredicted RBP14.12□□□□□ -0.15
CHMP3-208ENST00000486404 RABGGTAQ92696 567 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 EPSTI1Q96J88 318 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 CLIC6Q96NY7 704 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 CD320Q9NPF0 282 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 BLOC1S4Q9NUP1 217 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 CACNG4Q9UBN1 327 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 SRPRBQ9Y5M8 271 aaKnown RBP14.12□□□□□ -0.15
CHMP3-208ENST00000486404 C5orf42Q9H799 3197 aa14.12□□□□□ -0.15
CHMP3-208ENST00000486404 HNRNPDLO14979 420 aaKnown RBP14.11□□□□□ -0.15
CHMP3-208ENST00000486404 TOM1L1O75674 476 aa14.11□□□□□ -0.15
CHMP3-208ENST00000486404 KIF4AO95239 1232 aa14.11□□□□□ -0.15
CHMP3-208ENST00000486404 CNPP09543 421 aaKnown RBP14.11□□□□□ -0.15
CHMP3-208ENST00000486404 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
CHMP3-208ENST00000486404 ABCD1P33897 745 aa14.11□□□□□ -0.15
CHMP3-208ENST00000486404 STAT6P42226 847 aa14.11□□□□□ -0.15
CHMP3-208ENST00000486404 LIG4P49917 911 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms