RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NOTCH4Q99466 2003 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 NAV2Q8IVL1 2488 aa9.36□□□□□ -0.91
XRN1-212ENST00000486211 WNT7AO00755 349 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 BACH1O14867 736 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 ZNF623O75123 536 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 ECI2O75521 394 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 ALDH2P05091 517 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 MS4A1P11836 297 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 RAP1GAPP47736 663 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 MMP16P51512 607 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 TROAPQ12815 778 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 FAM160B1Q5W0V3 765 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 EFCAB12Q6NXP0 572 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 PDXDC2PQ6P474 469 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 AGMOQ6ZNB7 445 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 NPAS3Q8IXF0 933 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 LRRC71Q8N4P6 559 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 SNIP1Q8TAD8 396 aaKnown RBP9.35□□□□□ -0.91
XRN1-212ENST00000486211 DNASE1L2Q92874 299 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 LOXL4Q96JB6 756 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 SMOC1Q9H4F8 434 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 AGO4Q9HCK5 861 aaKnown RBP9.35□□□□□ -0.91
XRN1-212ENST00000486211 ZNF302Q9NR11 478 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 FAM105AQ9NUU6 356 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 CACNA2D2Q9NY47 1150 aa9.35□□□□□ -0.91
XRN1-212ENST00000486211 BPTFQ12830 3046 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 F8W810 466 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 MAN2B1O00754 1011 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 MAGEB2O15479 319 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 CHRNB1P11230 501 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 UBE2SQ16763 222 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 HEATR6Q6AI08 1181 aaKnown RBP9.34□□□□□ -0.91
XRN1-212ENST00000486211 TWF2Q6IBS0 349 aaKnown RBP9.34□□□□□ -0.91
XRN1-212ENST00000486211 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 CEP68Q76N32 757 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 CYB5R4Q7L1T6 521 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 SPEM1Q8N4L4 309 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 B3GALT6Q96L58 329 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
XRN1-212ENST00000486211 LY9Q9HBG7 655 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 C2orf42Q9NWW7 574 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 FNIP2Q9P278 1114 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 ANKFY1Q9P2R3 1169 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 FBXW11Q9UKB1 542 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 PCDHA6Q9UN73 950 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 PRG3Q9Y2Y8 225 aaPredicted RBP9.34□□□□□ -0.91
XRN1-212ENST00000486211 NEUROG3Q9Y4Z2 214 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 PCDHA8Q9Y5H6 950 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
XRN1-212ENST00000486211 LAMA5O15230 3695 aa9.34□□□□□ -0.91
XRN1-212ENST00000486211 SDK1Q7Z5N4 2213 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 DDX39AO00148 427 aaKnown RBP9.33□□□□□ -0.92
XRN1-212ENST00000486211 DHX15O43143 795 aaKnown RBP9.33□□□□□ -0.92
XRN1-212ENST00000486211 HNRNPA1P09651 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
XRN1-212ENST00000486211 SKIP12755 728 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 RPL17P18621 184 aaKnown RBP9.33□□□□□ -0.92
XRN1-212ENST00000486211 HOXA6P31267 233 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 TCEAL6Q6IPX3 200 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 C19orf48Q6RUI8 117 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 WDR5BQ86VZ2 330 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 PROSER1Q86XN7 944 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 GLYCTKQ8IVS8 523 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 COLGALT2Q8IYK4 626 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 GPR65Q8IYL9 337 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 URGCPQ8TCY9 931 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 TCEAL3Q969E4 200 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 KRT23Q9C075 422 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 PSTPIP2Q9H939 334 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 WDR81Q562E7 1941 aa9.33□□□□□ -0.92
XRN1-212ENST00000486211 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 C4orf47A7E2U8 309 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 MEIS1O00470 390 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 CCL16O15467 120 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 POU2F2P09086 479 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 CEACAM1P13688 526 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 FCARP24071 287 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 HOXA9P31269 272 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 MPLP40238 635 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 RAB27AP51159 221 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 DSC1Q08554 894 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 DRP2Q13474 957 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 COL28A1Q2UY09 1125 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 CEP55Q53EZ4 464 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
XRN1-212ENST00000486211 TANGO2Q6ICL3 276 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 MRPL10Q7Z7H8 261 aaKnown RBP9.32□□□□□ -0.92
XRN1-212ENST00000486211 KBTBD6Q86V97 674 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 TICAM2Q86XR7 235 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 ING5Q8WYH8 240 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 FAM3CQ92520 227 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 CHMP4BQ9H444 224 aaKnown RBP9.32□□□□□ -0.92
XRN1-212ENST00000486211 RSAD1Q9HA92 442 aa9.32□□□□□ -0.92
XRN1-212ENST00000486211 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms