RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 NDRG2Q9UN36 371 aaKnown RBP13.62□□□□□ -0.23
SSR4-210ENST00000485612 CNTNAP2Q9UHC6 1331 aa13.62□□□□□ -0.23
SSR4-210ENST00000485612 SHISA7A6NL88 538 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 M0R2N6 131 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 KCNK5O95279 499 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 RPL17P18621 184 aaKnown RBP13.61□□□□□ -0.23
SSR4-210ENST00000485612 SFNP31947 248 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 CNR2P34972 360 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 EVCP57679 992 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 SRSF5Q13243 272 aaKnown RBP13.61□□□□□ -0.23
SSR4-210ENST00000485612 Q4G0T1 1027 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 KSR1Q8IVT5 923 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 ZNF687Q8N1G0 1237 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 ETNPPLQ8TBG4 499 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 IER2Q9BTL4 223 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 SH3GLB2Q9NR46 395 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 PCDHA4Q9UN74 947 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 POLIQ9UNA4 740 aa13.61□□□□□ -0.23
SSR4-210ENST00000485612 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 MAN2B1O00754 1011 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 CCL16O15467 120 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 SLC37A4O43826 429 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 ECI2O75521 394 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 HNRNPA1P09651 372 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSR4-210ENST00000485612 CXCL12P48061 93 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 DNM2P50570 870 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 SSRP1Q08945 709 aaKnown RBP13.6□□□□□ -0.23
SSR4-210ENST00000485612 STK3Q13188 491 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 USP41Q3LFD5 358 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 PLA2G4FQ68DD2 849 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 RUFY3Q7L099 469 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 ZNF410Q86VK4 478 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 BLIDQ8IZY5 108 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 C12orf50Q8NA57 414 aaPredicted RBP13.6□□□□□ -0.23
SSR4-210ENST00000485612 MBOAT7Q96N66 472 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 COLEC11Q9BWP8 271 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 NIFKQ9BYG3 293 aaKnown RBP13.6□□□□□ -0.23
SSR4-210ENST00000485612 PLA2G2FQ9BZM2 168 aa13.6□□□□□ -0.23
SSR4-210ENST00000485612 CYP3A7-CYP3A51PA0A087WV96 503 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 F8W810 466 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 EML1O00423 815 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 NR1I2O75469 434 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 CYP3A7P24462 503 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 FNTBP49356 437 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 SATB1Q01826 763 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 CREMQ03060 361 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 SF3A2Q15428 464 aaKnown RBP13.59□□□□□ -0.23
SSR4-210ENST00000485612 INF2Q27J81 1249 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 XKR3Q5GH77 459 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 STPG1Q5TH74 334 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 LIN9Q5TKA1 542 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 RHPN2Q8IUC4 686 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 FAM160A2Q8N612 972 aaPredicted RBP13.59□□□□□ -0.23
SSR4-210ENST00000485612 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
SSR4-210ENST00000485612 RDM1Q8NG50 284 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
SSR4-210ENST00000485612 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 SUCLA2Q9P2R7 463 aaPredicted RBP13.59□□□□□ -0.23
SSR4-210ENST00000485612 FBXW11Q9UKB1 542 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 KCNJ14Q9UNX9 436 aa13.59□□□□□ -0.23
SSR4-210ENST00000485612 FASNP49327 2511 aaKnown RBP13.59□□□□□ -0.23
SSR4-210ENST00000485612 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 SRRM3A6NNA2 597 aaPredicted RBP13.58□□□□□ -0.24
SSR4-210ENST00000485612 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 XYLBO75191 536 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 MAFO75444 373 aaPredicted RBP13.58□□□□□ -0.24
SSR4-210ENST00000485612 DEXIO95424 95 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 NCLP19338 710 aaKnown RBP13.58□□□□□ -0.24
SSR4-210ENST00000485612 PSMA5P28066 241 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 RING1Q06587 406 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 FUT10Q6P4F1 479 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 ANO5Q75V66 913 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 CEP68Q76N32 757 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 NPAS3Q8IXF0 933 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 DAGLBQ8NCG7 672 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 UBN1Q9NPG3 1134 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 GJB4Q9NTQ9 266 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 AGPAT5Q9NUQ2 364 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 WRAP73Q9P2S5 460 aaPredicted RBP13.58□□□□□ -0.24
SSR4-210ENST00000485612 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 VWA8A3KMH1 1905 aa13.58□□□□□ -0.24
SSR4-210ENST00000485612 ARL5CA6NH57 179 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 AXIN1O15169 862 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 REC8O95072 547 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 C8AP07357 584 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 ZNF806P0C7X5 589 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 ITGA4P13612 1032 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 NPEPPSP55786 919 aa13.57□□□□□ -0.24
SSR4-210ENST00000485612 DSC1Q08554 894 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms