RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 PRCPP42785 496 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 MCL1Q07820 350 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 NCBP1Q09161 790 aaKnown RBP13.39□□□□□ -0.27
TRA2B-213ENST00000485530 MORC3Q14149 939 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 FAM43BQ6ZT52 329 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-213ENST00000485530 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 CEP120Q8N960 986 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-213ENST00000485530 HVCN1Q96D96 273 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 KCTD10Q9H3F6 313 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 NXF3Q9H4D5 531 aaKnown RBP13.39□□□□□ -0.27
TRA2B-213ENST00000485530 C1orf112Q9NSG2 853 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 IPPQ9Y573 584 aa13.39□□□□□ -0.27
TRA2B-213ENST00000485530 MYH11P35749 1972 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 N4BP3O15049 544 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 EIF3DO15371 548 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 EFCAB14O75071 495 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 DGKIO75912 1065 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 GJB5O95377 273 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 AMHP03971 560 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 IL9P15248 144 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 AKAP5P24588 427 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 ALCAMQ13740 583 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 NFKBIBQ15653 356 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 KNOP1Q1ED39 458 aaKnown RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 LEXMQ3ZCV2 418 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 CLLU1OSQ5K130 101 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 MPZL3Q6UWV2 235 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 RBM43Q6ZSC3 357 aaKnown RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 GSTCDQ8NEC7 633 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 ZNF689Q96CS4 500 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 CCDC51Q96ER9 411 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 NUP62CLQ9H1M0 184 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 RC3H2Q9HBD1 1191 aaKnown RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 MIOSQ9NXC5 875 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
TRA2B-213ENST00000485530 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
TRA2B-213ENST00000485530 TTC3P53804 2025 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 HNRNPDLO14979 420 aaKnown RBP13.37□□□□□ -0.27
TRA2B-213ENST00000485530 CLDN3O15551 220 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 OFD1O75665 1012 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 EOMESO95936 686 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 MBD3O95983 291 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 ALADP13716 330 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 KCNA5P22460 613 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 TNFSF9P41273 254 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 KCNJ6P48051 423 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 LIG4P49917 911 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 PMS1P54277 932 aaKnown RBP13.37□□□□□ -0.27
TRA2B-213ENST00000485530 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-213ENST00000485530 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
TRA2B-213ENST00000485530 LRRC55Q6ZSA7 311 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 NPAS4Q8IUM7 802 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 THNSL1Q8IYQ7 743 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 BICD1Q96G01 975 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 CASD1Q96PB1 797 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 MED15Q96RN5 788 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 KCNH6Q9H252 994 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 SNTG2Q9NY99 539 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
TRA2B-213ENST00000485530 CLIC2O15247 247 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 LINC00271P0C7V0 271 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 MCF2P10911 925 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 ABCD1P33897 745 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 OSTNP61366 133 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 ZNF568Q3ZCX4 644 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 COBLL1Q53SF7 1204 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 SYCP3Q8IZU3 236 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 GUF1Q8N442 669 aaKnown RBP13.36□□□□□ -0.27
TRA2B-213ENST00000485530 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 APOL6Q9BWW8 343 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 PCIF1Q9H4Z3 704 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 RMND1Q9NWS8 449 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 KLK14Q9P0G3 267 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 ZNF318Q5VUA4 2279 aa13.36□□□□□ -0.27
TRA2B-213ENST00000485530 MICAL3Q7RTP6 2002 aa13.35□□□□□ -0.27
TRA2B-213ENST00000485530 USP34Q70CQ2 3546 aa13.35□□□□□ -0.27
TRA2B-213ENST00000485530 B4GALT3O60512 393 aa13.35□□□□□ -0.27
TRA2B-213ENST00000485530 STAG3L1P0CL83 205 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms